Pairwise Alignments

Query, 236 a.a., Two-component transcriptional response regulator, OmpR family from Sphingobium sp. HT1-2

Subject, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (384), Expect = 5e-42
 Identities = 93/229 (40%), Positives = 137/229 (59%), Gaps = 7/229 (3%)

Query: 6   IILVEDDPPLRTLTARALQEHGYQVRPASSGPEMWVAFDAGPVDLVVLDVMLPGTNGIDL 65
           I+L++DD  L +L    LQ  G+++  A+ G E  +A  +  +DL++LDVM+P  NG++ 
Sbjct: 4   ILLIDDDTELTSLLTEVLQYEGFEISQANDG-EAGLAAVSDEIDLILLDVMMPKLNGMET 62

Query: 66  CRQIRRKSDVPIIFISAKGSETDRIVGLELGADDYLPKPFGTRELIARIRAILRRVGVER 125
            +++R K   P++ ++AKG E DR++GLELGADDYLPKPF  REL+ARIRAILRR     
Sbjct: 63  LKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNGL 122

Query: 126 GPDEQRENEARFDGWIVNFPRRELRSPTGAIVDLTGAEFDLLGSFLSHPQRVIARERL-I 184
            P      E +    I  +P ++     G +++LT  EF LL  F+  P   + +E L I
Sbjct: 123 TPKNSDVIECQD---IQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSI 179

Query: 185 ELSRTRMGDSSDRSIDVLVSRLRRKL-STEDRPAPITTVRGVGYMFNAE 232
           E+    +  + DR+ID+ VS LR+KL    D  A I T+RG GY+   E
Sbjct: 180 EVLGKHLA-AFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQE 227