Pairwise Alignments

Query, 354 a.a., RND efflux system, membrane fusion protein from Sphingobium sp. HT1-2

Subject, 377 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  152 bits (385), Expect = 1e-41
 Identities = 104/334 (31%), Positives = 170/334 (50%), Gaps = 26/334 (7%)

Query: 26  RPPALVEAVAIAPTRFTDNVEAVGTALANEQVILSAPVTERIDVLNFTDGGFVSKGQVIA 85
           +P   VE        +   + A+GT  A++ + LS  +   I  + F  G  VSKGQ I 
Sbjct: 38  KPAIDVETELARRMDWQSRLPAIGTLRASQGIDLSVEIAGTITDVQFQSGEKVSKGQPIV 97

Query: 86  RMAVGQEKAELAAAEATALQADQQLKRIQALKSRGFATGATVEQQIALANSARANADLAR 145
            +    E+A LA+AEA    +  + +R ++L  R   + +  ++  A +  A A+    R
Sbjct: 98  LLDSEMERASLASAEADLNLSRVEFQRARSLLDRQAISRSEYDRLNAESQKAEASVAQLR 157

Query: 146 AGIGDRTIRAPFSGWVSLRTVSPGAVITAGTAIATVSDISRIKLDFTVPETRLSMIREGM 205
           A +  + I APF+G + +R V  G  I AGT IAT+ D+S + +DF + E  + ++  G 
Sbjct: 158 ASLAKKRILAPFAGTIGIRQVDVGDYIAAGTPIATLQDLSTLYVDFFLAEQHVPLLALGQ 217

Query: 206 PIKALSAAWPDRPFNGTIATIDPVIDPATRAVRVRAIMPNPDKALKPGMLLTVSV-FSRE 264
            ++   AA+PD+ F G I  ++P ++  TR V+VRA + NPD  L PGM   + V    E
Sbjct: 218 KVQLRVAAYPDQRFEGVITALNPKVETTTRNVQVRAELANPDGRLLPGMFADLQVLLPTE 277

Query: 265 RQSLGVPELAV-----------IGDG--------DERFVFVLDGRTAKRTKVETGIRQNG 305
              + VPE A+           + +G        DE ++ V      +R  V TG R++G
Sbjct: 278 TAQVVVPETAITYTLYGNSVLLVTEGTPPEGVTTDEPYLVV------ERRFVTTGERRDG 331

Query: 306 LVEILGGVKAGQQIVTEGVVKLTDGAPVRLAGDK 339
           +  IL G++ G+Q++T G +KL  GA V +A ++
Sbjct: 332 VTVILEGLEGGEQVITAGQLKLDSGAHVAIAENR 365