Pairwise Alignments

Query, 226 a.a., Outer membrane porin, OmpA family from Sphingobium sp. HT1-2

Subject, 224 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  173 bits (438), Expect = 3e-48
 Identities = 94/222 (42%), Positives = 146/222 (65%), Gaps = 3/222 (1%)

Query: 3   ISHRIMMAAGLA-AMLTTTAC-TTDPETGQKRMSKAAIGGIGGALGGYLLGDLVGGRHDR 60
           IS++ ++AA LA + L  +AC TT+P T + + +KA  G I GA+ G  +G     + DR
Sbjct: 2   ISNQKLVAAILAGSTLFISACQTTNPYTNESQNAKATNGAIIGAIAGAAIGVASSSKSDR 61

Query: 61  TE-KILGAGIGAIAGAGIGSYMDEQERKLRQQTAGSGVDVIRQGDDLLLRMPSGITFAFN 119
            +  ++GA  GA  G GIG YMD QE +LR+Q   +GV V R GD+++L MP+ +TF  +
Sbjct: 62  GKGALIGAASGAAVGGGIGYYMDVQEAELRKQLQSTGVSVTRNGDNIILNMPNEVTFGVD 121

Query: 120 DASVQPQFRPTLDEVSSILSQYPKTYIDVYGHTDSDGSDAYNQTLSERRAQSVAGYLTSH 179
            + +  + +  LD V+ +  +Y +T ++V G TDS GS++YN  LS+ RA  VA YL S 
Sbjct: 122 QSVLSSRAKNVLDSVALVAKEYDETMLNVMGFTDSSGSESYNLRLSQVRAAEVANYLMSR 181

Query: 180 GVQSARIATRGFGETQPIASNATEEGKAANRRVEIKISPVTE 221
            ++S RI++ G GE++PIA N+T++G+A NRRVEI +SP+++
Sbjct: 182 EIKSQRISSVGMGESRPIADNSTQQGRAQNRRVEIVLSPMSQ 223