Pairwise Alignments

Query, 982 a.a., ATP-dependent DNA helicase from Sphingobium sp. HT1-2

Subject, 926 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  615 bits (1587), Expect = e-180
 Identities = 387/932 (41%), Positives = 524/932 (56%), Gaps = 61/932 (6%)

Query: 9   VTAVLGPTNTGKTHLAVERMCGHSSGMMGFPLRLLAREVYDRVVAIKGAQQVALITGEEK 68
           VTAVLGPTNTGKTH A+ERM  H SG++G PLRLLAREVY R+V   G   VALITGEEK
Sbjct: 13  VTAVLGPTNTGKTHYAIERMIAHDSGVIGLPLRLLAREVYTRLVEKVGHHNVALITGEEK 72

Query: 69  IVPPGARYFLCTAESMPISGGREAAAMTGGLSDFAFVALDEAQLGADPERGHIFTDRILR 128
           I P  ARY +CT E+MP    RE  A        +FVA+DE QL  D ERGHIFTDRIL 
Sbjct: 73  IAPHRARYSVCTVEAMP----RETTA--------SFVAIDEVQLAGDLERGHIFTDRILH 120

Query: 129 ARGREETMILGSASIAKTVKSLVPEVEIIGRPRFSTLSYAGAKKLSRLPRRSAIVAFSAE 188
            RGR ET++LG+A++   ++ L+P + ++ RPR S L YAG+KK++RLP RSAIVAFSA+
Sbjct: 121 LRGRGETLLLGAATMRPILEYLLPGITVVERPRMSQLLYAGSKKITRLPNRSAIVAFSAD 180

Query: 189 EVYAVAEMLRRFRGGAAVVMGALSPRTRNAQVQMFLNGDVDYLVATDAIGMGLNLDVAHV 248
           EVYA+AE++RR RGGAAVV+GALSPRTRNAQV ++  GDVDYLVATDAIGMGLNLDV HV
Sbjct: 181 EVYAIAELIRRQRGGAAVVLGALSPRTRNAQVALYQEGDVDYLVATDAIGMGLNLDVDHV 240

Query: 249 AFASLRKFDGRRSRRLTVAEMAQIAGRAGRHHKDGTFGSLGSEDGDAAFTPEEIEAIEAH 308
           AFA  RKFDG + R L  AE+AQ+AGRAGRH +DGTFG  G  D    F  + +  IE+H
Sbjct: 241 AFAQDRKFDGYQYRNLNPAELAQVAGRAGRHVRDGTFGVTGRVD---PFDEDLVHRIESH 297

Query: 309 RFPSVDQLFWRDGAPRTDSIDHLIIDLEARPDRPELRAAPQAVDLAVLRRMAEDPEVQAR 368
            F  V  L WR  A    S+  L   LEA P    L  A  AVD   L  +   PE+   
Sbjct: 298 EFDPVRVLQWRSKALDFSSLKALRKSLEAAPAVSGLARALPAVDQQALEHLTRYPEIVDV 357

Query: 369 VRSKRDVERLWAACGLPDFQKLGAEHHARTVARIWRFIAGNGSGFGGHIPRDWFAQQIAR 428
             +   VE+LW AC LPD++++    HA  ++ I+  +  +G+     +  D+ A+Q+ R
Sbjct: 358 ATASERVEKLWEACALPDYRRITPAQHADLISTIYADLVRHGT-----VNEDFMAEQVRR 412

Query: 429 LDSVQGDIDTLSGRIAAARTWSYIAHRPDWLANPVEMAERTRMLEEKLSDALHAALTQRF 488
            D   G+IDTLS RIA  RTW+Y+++RP WLA+P    E+TR +E++LSDALH  LT+RF
Sbjct: 413 ADHTDGEIDTLSARIAQIRTWTYVSNRPGWLADPTHWQEKTREIEDRLSDALHERLTKRF 472

Query: 489 VDRRTSVLLRDIGQNASNLPVTVDPDGTVCVDGETIGRLDGFRFSVDPATRLQDRKLLLA 548
           VDRRTSVL++ + +NA  L   +  +G V V+G  +G+L GFRF++   +   D K +  
Sbjct: 473 VDRRTSVLMKRLRENAM-LEAEISVNGDVFVEGHHVGQLAGFRFTLAAGSEGTDAKAVQG 531

Query: 549 AAERRLGKVLRVKADELMSAADTDFALMDDAGQTPGIAWQGTPVATLMAGAGLLAPEIRL 608
           AA + L      +A  L +A + D AL  D      + W G PVA L A   ++ P + L
Sbjct: 532 AAHKALALEFEARAARLHAAGNGDLALSSDG----LVRWLGDPVARLTASDHVMRPRVIL 587

Query: 609 DRALAALGPDVQKQVTTRLATWFEAQKQKHLLPLVKMSESAADPAVPAVVRAVFAQLADA 668
             A   L  + ++ V  R+  +        L PL  +S +     +  + + +  Q+ + 
Sbjct: 588 -LADEQLQANAREHVLARIERFVNHHISTVLKPLDDISRA---EDLEGLAKGLAFQIVEN 643

Query: 669 GGVAPRLDLDSALGHLDKDQRHLLRRAGIDIGVLDLYHPGLLKPGAARWRAALQAAR--- 725
            GV  R D+   +  LD++ R  +RR G+  G   ++ P LLKP  A     L A +   
Sbjct: 644 LGVLFRRDVAEEVKSLDQESRASIRRYGVRFGAYHIFLPALLKPAPAELITLLWALKNDG 703

Query: 726 IGKP----CLPLPQPGLTLIPTGEKPQEMGARIAGFRSFGPQMLRIDMAERMARTAHETI 781
           + KP     +P+   G T + T    +    ++AGFR  G + +RID+ ER+A      +
Sbjct: 704 LDKPGYGELIPMLAAGRTSVVTDPSFERTFYKLAGFRFLGKRAVRIDILERLADLIRPLL 763

Query: 782 A-------------KNEPFSALSPQIVSLGLSEEAFLQLMRAAGFR--PIDPVPTPAPVA 826
                             F A +  +  LG + +   ++++  G+R   +      A +A
Sbjct: 764 QWKPGTSPRPDGAYDGRRFVATTSMLSILGATPDDMEEILKGLGYRADAVTAEEAAAFLA 823

Query: 827 EAPAEAAPAVE-GTDVVEATEAAPEATAEAVAEAPVEADEGTPGEAATETPAEAPVAATG 885
               E APA E G  V +A     EA     A+AP    E T G AA E PA AP A T 
Sbjct: 824 SQNGETAPAEEAGASVADAGSVEAEA-----ADAPTAETEAT-GTAAAEAPA-APAAETE 876

Query: 886 ANWVFKGRQKGRPQGD--RGPRGPRRDQQQRP 915
           A        +  P GD    P  P    + +P
Sbjct: 877 AADTAAAETQAAPAGDDAAAPAEPEAPAEAKP 908