Pairwise Alignments

Query, 252 a.a., SSU ribosomal protein S2p (SAe) from Sphingobium sp. HT1-2

Subject, 220 a.a., 30S ribosomal protein S2 from Methanococcus maripaludis S2

 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 51/225 (22%)

Query: 5   VVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGDR-NGIHILDLSQTVPLFARALDFVSATV 63
           + T+   + +G H G  T +    M+ +I+  R +G+++LD+ +T      A  F+S   
Sbjct: 7   LTTLDTYLASGIHIG--TQQKTEDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSNYE 64

Query: 64  AGGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHRWLGGMLTNWKTISGSIKRLKTLEEKL 123
                ++ V  +  +  P+ E  + +G + V  R++ G LTN                  
Sbjct: 65  PED--IMAVTRRVYSVGPLKEFGKVTGINTVAGRFVPGTLTN------------------ 104

Query: 124 SGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTLGIP 183
                             R+  E            P+V+F+ D   ++ A+KEA  +GIP
Sbjct: 105 ---------------PSARKFAE------------PEVLFLSDPRVDKQALKEAIEIGIP 137

Query: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAVAAAATKGNRG 228
           V+ + D+      I F +P N+   +++ L    +A    K NRG
Sbjct: 138 VIGMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLIAREYMK-NRG 181