Pairwise Alignments

Query, 377 a.a., Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage from Sphingobium sp. HT1-2

Subject, 456 a.a., membrane-associated zinc metalloprotease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  145 bits (366), Expect = 2e-39
 Identities = 85/231 (36%), Positives = 134/231 (58%), Gaps = 12/231 (5%)

Query: 141 PAVAGMVQPGSAAAMAGIQPGDRIVSLNGRAMSTFDDIRLYAQIRPGEPVTILLDRKGQV 200
           P +A ++  GSAAA + ++ GD +V++NG+  + +       Q     PV + + R G+ 
Sbjct: 229 PQIA-LISEGSAAANSDLKVGDTLVAINGQQYTDWQAFVDIIQHSANVPVELTVRRNGEQ 287

Query: 201 IEKQGHVGAVSEDDGFGNKFRIGRLGIAPGE---PVIEPVSLLRAPV----VAIERTGQI 253
                   ++   DG      IG LG++P +   P    + L   P+    +A ++T Q+
Sbjct: 288 FAISVTPASIKNSDGK----EIGVLGVSPTQAQWPENMRLQLEYGPIDSFAIAADKTWQL 343

Query: 254 IRTMVETLGQVIGGDRSVKELGGPLKIAQVSGQAATLGLESFIFFIALISINLGFINLLP 313
           +    + +G++  GD SVK L GP+ IAQ +G +A  GL  F+ F+ALIS+NLG INLLP
Sbjct: 344 VAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIINLLP 403

Query: 314 IPMLDGGHLLFYGVEAVQRRPVSPQVQDWAYRSGLALLMTVMLLVTFNDLS 364
           +P+LDGGHLL+Y VE +  +PVS +VQ+  +R G ALL+ +M +  FND +
Sbjct: 404 LPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFA 454



 Score =  116 bits (291), Expect = 1e-30
 Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 10/174 (5%)

Query: 7   FLLTILAFVAVIGPLVFVHELGHYLVGRWCGVKAEAFSIGFGPEIAAWVDRRGTRWRLAA 66
           FL  + +F+  +G L+  HE GH+ V R CGVK E FSIGFG  I   V + GT + +A 
Sbjct: 4   FLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKTIWRKVGKDGTEYVVAM 63

Query: 67  LPLGGYVRFKGDMNAASQTDPKWLEMSAQDRAESFPAKPLWQRAAIVAAGPAINFLFAIL 126
           +PLGGYV+           D +  ++  + + ++F  K +WQR AIVAAGP  NF+FAI+
Sbjct: 64  IPLGGYVK---------MLDERVEDVPEELKDQAFNRKSVWQRIAIVAAGPIANFIFAII 114

Query: 127 ILAAFAFLHGESRTPAVAGMVQPGSAAAMAGIQPGDRIVSLNGRAMSTFDDIRL 180
            L  F +L G      V     PGSAAA   +    ++ +++G+A+  ++++ L
Sbjct: 115 AL-YFMYLIGVPSLKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEVNL 167