Pairwise Alignments

Query, 301 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Sphingobium sp. HT1-2

Subject, 294 a.a., (2E,6E)-farnesyl diphosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (480), Expect = 7e-53
 Identities = 111/263 (42%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 39  LYEAMRHAAIGGGKRLRPLLVQATCDLFNISRESALRVGLAIECIHVYSLVHDDLPAMDN 98
           L EAMR+  + GGKR RP LV  T  +             A+ECIH YSL+HDDLPAMD+
Sbjct: 30  LIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDD 89

Query: 99  DDMRRGKPTVHKAFDEATAILAGDCLHDLAFEILAD-EQTHPDAFVRIDLVKALAVASGP 157
           D++RRGKPT H  FDEATAIL GD L  LAF ILA+ + +      R+ +++ALA ASG 
Sbjct: 90  DELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAGETQRVAMLQALAEASGA 149

Query: 158 AGMAGGQMMDLEAEKTRFDLATVTRLQNLKTGALIGFCVDAAAIMARIPVEAR-TGLHGY 216
            GM  GQ +DL AE     L  +  +   KTGAL+   +   A+ A     A    L  Y
Sbjct: 150 QGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGALAAGEKGRAMLPHLDRY 209

Query: 217 ARDIGLAFQIADDLLDVEGDAALAGKALGKDAAAGKETFVSLLGVDRAREQGRLLVEQAK 276
           A  +GLAFQ+ DD+LD+  D    GK  G D    K T+ +LLG++ A+++   L+++A 
Sbjct: 210 AEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLEGAQQKAHTLLQEAL 269

Query: 277 AHLHGHGAEADLLRAIADYIVER 299
             L       + L   A Y+VER
Sbjct: 270 LALEAIPYNTEHLEEFARYVVER 292