Pairwise Alignments

Query, 301 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Sphingobium sp. HT1-2

Subject, 305 a.a., Polyprenyl synthetase (NCBI) from Rhodospirillum rubrum S1H

 Score =  300 bits (769), Expect = 2e-86
 Identities = 160/289 (55%), Positives = 196/289 (67%), Gaps = 4/289 (1%)

Query: 15  ATVAADIDRAFDALLAIPDDPRHRLYEAMRHAAIGGGKRLRPLLVQATCDLFNISRESAL 74
           A  A  I+     L+   D P  R+ +AMR+AA+ GGKRLRP LV  +  LF++SR  AL
Sbjct: 15  AAEALAINDHLSQLMPATDGPEGRVVDAMRYAALEGGKRLRPFLVLQSAQLFSVSRACAL 74

Query: 75  RVGLAIECIHVYSLVHDDLPAMDNDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEILAD 134
            V  AIE IH YSL+HDDLPAMDNDD+RRG+PTVH+ +DE TAILAGD L   AFE++A 
Sbjct: 75  NVAAAIEMIHCYSLIHDDLPAMDNDDLRRGRPTVHRQYDEPTAILAGDALLTKAFEVIAL 134

Query: 135 EQTHPDAFVRIDLVKALAVASGPAGMAGGQMMDLEAEK----TRFDLATVTRLQNLKTGA 190
             TH D  VR DLV  LA+A+G  GM GGQM+DL AE+       D+  +TR+  LKTG 
Sbjct: 135 PGTHSDPAVRCDLVTELAIAAGAKGMVGGQMIDLMAERGLIDGALDVPAITRMHQLKTGR 194

Query: 191 LIGFCVDAAAIMARIPVEARTGLHGYARDIGLAFQIADDLLDVEGDAALAGKALGKDAAA 250
           LI F   A AI+ + P   R  L  YA D+GLAFQIADDLLDVEGD A  GK  GKD A+
Sbjct: 195 LISFSSIAGAILGKAPRSQRQALFNYAHDLGLAFQIADDLLDVEGDTATLGKTAGKDEAS 254

Query: 251 GKETFVSLLGVDRAREQGRLLVEQAKAHLHGHGAEADLLRAIADYIVER 299
           GK TFVSLLG++RAR+Q  +L EQA  HL     +ADLLRA+A ++V+R
Sbjct: 255 GKSTFVSLLGLERARDQADMLAEQAVNHLDAFDEKADLLRAVARFVVDR 303