Pairwise Alignments

Query, 301 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Sphingobium sp. HT1-2

Subject, 293 a.a., geranyltranstransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  220 bits (561), Expect = 3e-62
 Identities = 121/267 (45%), Positives = 161/267 (60%)

Query: 33  DDPRHRLYEAMRHAAIGGGKRLRPLLVQATCDLFNISRESALRVGLAIECIHVYSLVHDD 92
           +D   +L  AM H A+ GGKR+RP LV +   +F +  E       AIECIH YSL+HDD
Sbjct: 25  EDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDD 84

Query: 93  LPAMDNDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEILADEQTHPDAFVRIDLVKALA 152
           LPAMD+D +RRG+PTVH AFDEATAILAGD L  LAFEI+ +      +   I +V+ALA
Sbjct: 85  LPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGITSEQHIAMVRALA 144

Query: 153 VASGPAGMAGGQMMDLEAEKTRFDLATVTRLQNLKTGALIGFCVDAAAIMARIPVEARTG 212
            ASG  GM GGQ +DL +     DL  +T+L N+KTGALI   V+ A I A  P +    
Sbjct: 145 KASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALISCAVELALIAANAPKDQYQT 204

Query: 213 LHGYARDIGLAFQIADDLLDVEGDAALAGKALGKDAAAGKETFVSLLGVDRAREQGRLLV 272
           +  +A  +GLAFQ+ DD+LD+       GK  G DA + K TF  LLG+  A++    L+
Sbjct: 205 MMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAKDTATQLI 264

Query: 273 EQAKAHLHGHGAEADLLRAIADYIVER 299
           ++A + L      + L+   A YI+ER
Sbjct: 265 QEALSALAKLPYNSQLIADFARYIIER 291