Pairwise Alignments

Query, 301 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Sphingobium sp. HT1-2

Subject, 287 a.a., geranylgeranyl diphosphate synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  202 bits (513), Expect = 1e-56
 Identities = 115/264 (43%), Positives = 160/264 (60%), Gaps = 2/264 (0%)

Query: 38  RLYEAMRHAAIGGGKRLRPLLVQATCDLFNISRESALRVGLAIECIHVYSLVHDDLPAMD 97
           RL  AM ++ + GGKRLRP+L  +T  +  +   S +    AIE IH YSL+HDDLPAMD
Sbjct: 22  RLQSAMEYSLLAGGKRLRPVLCLSTAGMTGLDPMSVMPFAAAIELIHTYSLIHDDLPAMD 81

Query: 98  NDDMRRGKPTVHKAFDEATAILAGDCLHDLAFEILADEQTHPDAFVRIDLVKALAVASGP 157
           +DD+RRG+P+ H+ FDEATAILAGD L   AF+++A       A   +  ++ ++ A+G 
Sbjct: 82  DDDLRRGRPSNHRQFDEATAILAGDGLLTDAFDLMASVGGGIPAGHVLAALREVSSAAGS 141

Query: 158 AGMAGGQMMDLE-AEKTRFDLATVTRLQNLKTGALIGFCVDAAAIMARIPVEARTGLHGY 216
           +GM GGQ +D++   +   DLA +  +  +KTGALI     A A++   P  A   + GY
Sbjct: 142 SGMVGGQALDMDYTGRDDIDLAALRTMHAMKTGALIRCSCVAGALLGGAPASAVEQVAGY 201

Query: 217 ARDIGLAFQIADDLLDVEGDAALAGKALGKDAAAGKETFVSLLGVDRAREQGRLLVEQAK 276
              IG AFQI DD+LD  GD A  GK +G D   GK T+ SLLG++R+R   +   + A 
Sbjct: 202 GAAIGAAFQIVDDILDETGDEAQLGKPVGSDVEQGKVTYPSLLGIERSRALAQEQADIAV 261

Query: 277 AHLHG-HGAEADLLRAIADYIVER 299
             L    G +AD LRA+A YIV+R
Sbjct: 262 TCLADFEGEDADFLRALAQYIVDR 285