Pairwise Alignments

Query, 225 a.a., Pentapeptide repeat family protein from Sphingobium sp. HT1-2

Subject, 266 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 39/109 (35%), Positives = 52/109 (47%)

Query: 27  LIDCDLEAAELAQLDLTGWQFERCNLRNADLAGAMLERTRWQGCRGGGANFTGCDLSDAV 86
           L D  L  A L+   LTG   +R NL  ADL+GA L +T  +G     AN  G +L+ A 
Sbjct: 43  LQDSGLVLARLSGARLTGSNLQRANLSGADLSGADLRQTDLRGASLQRANLAGANLTGAR 102

Query: 87  LTGCDFNNVVLRRARLEGARLAQCKLTGADLSDLRALEIDMAECLLIDA 135
           L G D     L  A L   +LA   + GA   D+ AL  +  +   I+A
Sbjct: 103 LDGVDLREAWLTEAILTPQQLALAHIQGAQGLDVTALPFERYQAWGIEA 151



 Score = 52.8 bits (125), Expect = 6e-12
 Identities = 39/107 (36%), Positives = 49/107 (45%)

Query: 33  EAAELAQLDLTGWQFERCNLRNADLAGAMLERTRWQGCRGGGANFTGCDLSDAVLTGCDF 92
           E  E  Q  LT  Q ERC+L+++ L  A L   R  G     AN +G DLS A L   D 
Sbjct: 24  ENPEDLQRLLTTRQCERCDLQDSGLVLARLSGARLTGSNLQRANLSGADLSGADLRQTDL 83

Query: 93  NNVVLRRARLEGARLAQCKLTGADLSDLRALEIDMAECLLIDARLPG 139
               L+RA L GA L   +L G DL +    E  +    L  A + G
Sbjct: 84  RGASLQRANLAGANLTGARLDGVDLREAWLTEAILTPQQLALAHIQG 130



 Score = 48.9 bits (115), Expect = 9e-11
 Identities = 28/59 (47%), Positives = 35/59 (59%)

Query: 132 LIDARLPGLSFRKQRLSRIDFSQADLRKCDFRMASFEGCSLREAMLDGARFEGADLRGA 190
           L  ARL G + ++  LS  D S ADLR+ D R AS +  +L  A L GAR +G DLR A
Sbjct: 53  LSGARLTGSNLQRANLSGADLSGADLRQTDLRGASLQRANLAGANLTGARLDGVDLREA 111



 Score = 45.8 bits (107), Expect = 8e-10
 Identities = 28/75 (37%), Positives = 35/75 (46%)

Query: 126 DMAECLLIDARLPGLSFRKQRLSRIDFSQADLRKCDFRMASFEGCSLREAMLDGARFEGA 185
           D+ +  L+ ARL G       L R + S ADL   D R     G SL+ A L GA   GA
Sbjct: 42  DLQDSGLVLARLSGARLTGSNLQRANLSGADLSGADLRQTDLRGASLQRANLAGANLTGA 101

Query: 186 DLRGADIGGVHLGDA 200
            L G D+    L +A
Sbjct: 102 RLDGVDLREAWLTEA 116



 Score = 37.0 bits (84), Expect = 4e-07
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 80  CDLSDAVLTGCDFNNVVLRRARLEGARLAQCKLTGADLSDLRALEIDMAECLLIDARLPG 139
           CDL D+ L     +      ARL G+ L +  L+GADLS     + D+    L  A L G
Sbjct: 41  CDLQDSGLVLARLSG-----ARLTGSNLQRANLSGADLSGADLRQTDLRGASLQRANLAG 95

Query: 140 LSFRKQRLSRIDFSQA 155
            +    RL  +D  +A
Sbjct: 96  ANLTGARLDGVDLREA 111



 Score = 30.0 bits (66), Expect = 4e-05
 Identities = 21/70 (30%), Positives = 29/70 (41%)

Query: 154 QADLRKCDFRMASFEGCSLREAMLDGARFEGADLRGADIGGVHLGDASRFRGATISRDQA 213
           + DL+     +A   G  L  + L  A   GADL GAD+    L  AS  R      +  
Sbjct: 40  RCDLQDSGLVLARLSGARLTGSNLQRANLSGADLSGADLRQTDLRGASLQRANLAGANLT 99

Query: 214 GELLAELGLK 223
           G  L  + L+
Sbjct: 100 GARLDGVDLR 109