Pairwise Alignments

Query, 524 a.a., Transcription termination protein NusA from Sphingobium sp. HT1-2

Subject, 500 a.a., Transcription termination/antitermination protein NusA from Enterobacter sp. TBS_079

 Score =  384 bits (985), Expect = e-111
 Identities = 222/520 (42%), Positives = 312/520 (60%), Gaps = 29/520 (5%)

Query: 11  ELIAIANSVASEKMIDKAIVIEAMEDAIQRAARARYGAENDIRAKLDPDSGDLRLWRVVE 70
           E++A+  +V++EK + +  + EA+E A+  A + +Y  E D+R ++D  SGD   +R   
Sbjct: 4   EILAVVEAVSNEKSLPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWV 63

Query: 71  VVEVVEDYFKQVDLKQAAKLKKDAVVGDFIVDPLPAIDLGRIDAQSAKQVIFQKVRDAER 130
           +VE V    K++ L+ A    +   VGD++ D + ++   RI  Q+AKQVI QKVR+AER
Sbjct: 64  IVEEVTQPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAER 123

Query: 131 ERQFDEFKDRVGEIITGVVKSVEFGHVVVNL------GRAEGVIRRDQQIPREVVRVGDR 184
               D+F+D+ GEIITGVVK V   ++ + +      G AE VI R+  +PRE  R GDR
Sbjct: 124 ALVVDQFRDQEGEIITGVVKKVNRDNISLEIKSEGLPGNAEAVILREDMLPRENFRPGDR 183

Query: 185 IRSVVLNVRRENRGPQIFLSRAHPEFMKKLFAQEVPEIYDGVITIMAAARDPGSRAKIGV 244
           IR V+  VR E RG Q+F++R+ PE + +LF  EVPEI + VI I AAARDPGSRAKI V
Sbjct: 184 IRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAV 243

Query: 245 ISRDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQPAQVARVVI 304
            + D  IDPVGACVGM+G+RVQAV  E+ GE+IDI+ W ++ A FV+NA+ PA VA +V+
Sbjct: 244 KTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVV 303

Query: 305 DEEEERIEVVVPDDQLSLAIGRRGQNVRLASQLTGKAIDIMTEADASEKRQKEFVSRSEM 364
           DE++  +++ V    L+ AIGR GQNVRLASQL+G  +++MT  D   K Q E  +  + 
Sbjct: 304 DEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDT 363

Query: 365 FQNELDVDETLSQLLVAEGFGELEEVAYVSVEELAGIEGFDEDLAAELQSRAQEALDRRE 424
           F   LD+DE  + +LV EGF  LEE+AYV ++EL  I+G DE     L+ RA+ AL    
Sbjct: 364 FTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIDGLDEATVEALRERAKNALTTLA 423

Query: 425 QAAREERQALGVEDALADMPHLTEAMLVTLGKAGVKTLDDLADLATDELVQKKRVDQRRR 484
            A  E        D L ++  L  A+   L   GV TL+DLA+   D+L   +       
Sbjct: 424 LAQEESLGDKKPADDLLNLEGLDRAIAFKLAARGVCTLEDLAEQGVDDLADIE------- 476

Query: 485 KSDSGNEDKGGILAAYGLTDEQGNEIIMAARAHWFEGEEA 524
                           GLTDE+  E+IMAAR   + G+EA
Sbjct: 477 ----------------GLTDEKAGELIMAARNICWFGDEA 500