Pairwise Alignments

Query, 341 a.a., tRNA pseudouridine(55) synthase (EC 5.4.99.25) from Sphingobium sp. HT1-2

Subject, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (392), Expect = 1e-42
 Identities = 107/336 (31%), Positives = 160/336 (47%), Gaps = 65/336 (19%)

Query: 1   MHGWIILDKPHGLGSTQAVSAVKRALRTQREVLGGTEKWKVGHGGTLDPLATGVLPIAIG 60
           +HG I+LDKP G+ S  A+  VKR        L G EK   GH G LDPLATG+LPI +G
Sbjct: 10  IHGVILLDKPTGISSNDALQKVKR--------LYGAEK--AGHTGALDPLATGMLPICLG 59

Query: 61  EATKLAGRMLDSDKIYDFTIAFGAQTDTLDLEGKVIAESEVRPTLAQLEAILPRFTGPIE 120
           EATK +  +LDSDK Y      G +TDT D +G+V+    V      L A + +F G  +
Sbjct: 60  EATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETD 119

Query: 121 QAPPAYSAILIDGQRAYDLARKGEQVEMKTRSVTIHELFLPGTGRGTASRSDGVEGQAPL 180
           Q P  +SA+   G+  Y+ AR+G +V  + R +T++E+ L         R +G E     
Sbjct: 120 QVPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIEL--------HRFEGDE----- 166

Query: 181 DMTLEGQDRVGVPLHHASHGSPPRAGEELASVTLRAHVSKGTYIRSLARDIALALGTVGH 240
                                          V +  H SKGTYIR++  D+   LG   H
Sbjct: 167 -------------------------------VEMEVHCSKGTYIRTIVDDLGEMLGCGAH 195

Query: 241 VTMLRRIKAGPFTLETAISLDKL---------DEAARGGDIGELMLPLTAGLDDIPALAV 291
           VTMLRR+    +  E  ++L++L         DE A    +  L+LP+   ++ +P + V
Sbjct: 196 VTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPMDTAVEALPEVNV 255

Query: 292 SPDEALALRQGK--MLMGKPHTGLLLAMLGDTPVAL 325
            P+    ++ G+   + G P  G++    G+  + L
Sbjct: 256 IPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFL 291