Pairwise Alignments

Query, 311 a.a., RpfF protein from Sphingobium sp. HT1-2

Subject, 716 a.a., fatty oxidation complex, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.8 bits (146), Expect = 9e-14
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 8/131 (6%)

Query: 108 FNLGGDLELFAGCIERGD--LPGLVQYGHACIDVVHRTWRNGDMPVVSIALAQGDALGGG 165
           F +G D+  F G   + D  L   V+  +A  + +       D+P  + +  +G ALGGG
Sbjct: 64  FIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLE------DLPFPTASAIKGFALGGG 117

Query: 166 FEALLCFDVVIAERSARFGLPEMLFGLFPGMGAYSILSRKLGRLAAERMILSGKVFTAEE 225
            E +L  D  IA+ +A+ GLPE   G+ PG G    L R +G   A   I +G    AE+
Sbjct: 118 CETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGNEQRAED 177

Query: 226 MFDMGIVHTLV 236
              +G V  +V
Sbjct: 178 ALKVGAVDAVV 188