Pairwise Alignments

Query, 454 a.a., Two-component system response regulator protein from Sphingobium sp. HT1-2

Subject, 467 a.a., sigma-54 dependent DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  290 bits (742), Expect = 7e-83
 Identities = 181/461 (39%), Positives = 259/461 (56%), Gaps = 21/461 (4%)

Query: 8   LLIVEDDP----GLQRQLRWAYEDYQLFIAGDRLEAIEMLRMEAPDVVTLDLGLPPDPDG 63
           +LIV+D+P    GL R +   +    + +A    EA+ +++     ++  DL +P     
Sbjct: 9   ILIVDDEPDFAHGLARLVSRDFPAASVSVALSGAEALHIIQGSGVALLLTDLRMPD---- 64

Query: 64  TSEGFATLEEILRIKPDTKVIVASGHGARESALNAISGGAYDFYQKPVDIDELGLIVRRA 123
             +G   +++ + + P T VI+ + HG+ E+A+ A+  GAYDF  KPV  +EL   + +A
Sbjct: 65  -MDGMELMQQAMTVDPTTSVILLTAHGSIETAVAALKNGAYDFLTKPVRREELQRTLNKA 123

Query: 124 FHVHALEQENARLAEAAPEGGRVLGRMITGASEMM-RVARTIERVASADVSVMLLGASGT 182
                + +EN RL +   +G   + R + G S +M R+  TI  +A+ D SV++ G SGT
Sbjct: 124 LERIRILKENKRLRQMMQQG--CIERQMIGESPVMQRLKETIAAIAATDYSVLIRGESGT 181

Query: 183 GKELLAQGLHDASPRRGGAFVAINCAAIPETLLESELFGHEKGAFTGAVKTTPGKIEQAQ 242
           GKEL+A  LH    RR    V +NC +IP+ LLESELFGH KGAFTGA +T  G    AQ
Sbjct: 182 GKELVADMLHRLGSRRERPLVKVNCPSIPDQLLESELFGHVKGAFTGADRTRRGLFMSAQ 241

Query: 243 GGTLFLDEVGDIPLPLQVKLLRFLQERVIERIGGRQPIAVDTRIVCATHQDLDAMIAAAS 302
            GTL LDE+GDI   LQ KLLR LQER I  +G      VD RI+ +T++ L+  I    
Sbjct: 242 RGTLLLDEIGDIGEALQTKLLRVLQEREIRPVGSSASTLVDVRIIASTNRALEERIKQGL 301

Query: 303 FREDLYYRLAEIVIRIPALRDRPGDPALLARHFLTRFAQDMNPQVKGFAPDALAALDAWG 362
           FREDL+YRL  + I  P LR+R  D  LLA HF+    ++++  VK  +P ALA L    
Sbjct: 302 FREDLFYRLNVLTIHTPPLRERRDDIPLLADHFVAATCRELSSPVKRISPGALACLAGRE 361

Query: 363 WPGNVRELENRVKRAVIMADGKHVTAADLDL-DG----DRAEGSEVVNLKAAR----EMA 413
           WPGNVREL+N ++R V+   G  +  A L L DG      AE   +V  K A+    E  
Sbjct: 362 WPGNVRELQNYIRRLVVFCPGDTIDTAHLRLVDGTTCPTTAETPSLVPYKEAKGAVVEDF 421

Query: 414 DRRAIRRAIARTDGNISSAAKILGISRPTLYDLLKQYKMQG 454
            RR +   + +T GNIS AA++ GI R +L  +L++    G
Sbjct: 422 TRRYVEGLLRQTGGNISEAARLSGIERVSLQKILRRLGTSG 462