Pairwise Alignments

Query, 460 a.a., Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) from Sphingobium sp. HT1-2

Subject, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (390), Expect = 5e-42
 Identities = 114/405 (28%), Positives = 193/405 (47%), Gaps = 26/405 (6%)

Query: 15  KIGMVSLGCPKNLVDSERILTKLRS-DGYQMSADYAGADVVLVNTCGFLDSAKEESLEAI 73
           K+ + + GC  N  DS ++   L + +GY+++     ADV+L+NTC   + A+E+    +
Sbjct: 4   KLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63

Query: 74  GEAMA----ENGRVI-VTGCMG-DEADVIRAKFPQVLAVTGA---HQYEQVVNAVHDASP 124
           G        + G VI V GC+   E D IR + P V  + G    H+  +++     +  
Sbjct: 64  GRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDA 123

Query: 125 PIPNAFVDLVPEGGLKLTPRHY---SYLKISEGCNHRCSFCIIPSIRGDLVSRRIDAVLR 181
           P+ +     + +      PR     +++ I EGC+  C++C++P  RG+ VSR +D VL 
Sbjct: 124 PVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLF 183

Query: 182 EAEKLVAAGTKELLVISQDTSAYGVDTRHEPRMWKGREVRAHMTDMARELGQLRTADGVA 241
           E  +L   G +E+ ++ Q+ +AY           +G      +   A  L  + T DG+ 
Sbjct: 184 EIAQLAEQGVREVNLLGQNVNAY-----------RGATHDGGICSFAELLRLVATIDGID 232

Query: 242 PWVRLHYVYPYPHVDHVIPLMAEGL-LTPYLDIPFQHASPSVLKAMKRPANEAKVLDRIR 300
             +R    +P    D +I +  +   L  +L +P Q  S  +L  MKRP    +    IR
Sbjct: 233 R-IRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIR 291

Query: 301 KWRDICPDIAIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANDLPG 360
           K R   PDI I S F+VGFPGET+ DFQ  +  + +   D   +F F P  G  A D P 
Sbjct: 292 KLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPC 351

Query: 361 AVPEEVKEERYQRIMEKTAAISAAKLQAKVGRVMPVIIDEVGEPD 405
            + EEVK+ER   + ++  + +    +  +G    ++++   + D
Sbjct: 352 DLSEEVKKERLYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKD 396