Pairwise Alignments

Query, 633 a.a., Outer membrane component of TAM transport system from Sphingobium sp. HT1-2

Subject, 636 a.a., surface antigen (D15) (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 1e-23
 Identities = 130/554 (23%), Positives = 217/554 (39%), Gaps = 48/554 (8%)

Query: 113 LDRLLRADGYYAARVRGSVAPPPAGSDKLSVIFDVTPGPLYVLDTVEIAGLAETGPRE-- 170
           ++  L + GYY  ++   +  P +G   L +   VTPG   V+  ++I    E    E  
Sbjct: 92  IEAALHSLGYYKGKIDQQLESPESGPWTLRLT--VTPGAPTVIQWIDIQLSGEILDDEVI 149

Query: 171 ETLRGAFTMKSGDPINADRILAGQTALATALGENGYPFARVDEPEVRIDHEARNGDLDII 230
                   +K GD +N     A ++ L T     GY   +    ++ ++ +  +  + + 
Sbjct: 150 NAWLRQIKVKPGDVLNHGEYEAIKSQLLTYALARGYFEGKYLTNKIVVNRDLDSAQISLH 209

Query: 231 VTPGGYRSFGQILLDNDDVFSARHLQRMARFEPGETYRATDVEDLRRAIVTTGLVSSVTL 290
              G     G++  +  D+     L ++  FEP   Y    +  L R +V TG  +++ +
Sbjct: 210 YDSGPRYRIGEVSFNGHDLVPG-FLDKLIPFEPDSHYSTGKIGALNRELVDTGYFTNIKV 268

Query: 291 TPK-DAGDGEHVDLDVDLRPAPMRTIAGELGYGTGEGY--------RAEVSWQ------- 334
            P+ D    + V + V++ P P  +I  ELG G   G         R  V+W+       
Sbjct: 269 LPQLDKMQDDRVPIRVEVTPKPSHSI--ELGLGADIGNSIDNNIEPRVRVTWRTPQINRY 326

Query: 335 -HRNLFPPEGS------LTLRGVLGTQEQTAQATYRRNNFRERDHVLTGLVSYSNIRRDA 387
            H      E S      LT   +  T     Q   R    R++  V           R+ 
Sbjct: 327 GHSQETSLEWSPDRPKFLTTYTIPLTHPLDDQLKLRLGLLRDKYGVTQIYDPDKRDYRNT 386

Query: 388 YDARTITLSGGLERQTNILFQKHWVWRVGAELIASDEADAFSGGSRRTFLIGAVPLSLTY 447
            +  ++    G+ RQ  +     W++    + I  +   +    +    L+G   LS T 
Sbjct: 387 GELESVKKLVGVVRQKRL--HNQWLFTYSLDAINEEYTQSDIKYNPDILLLGT-SLSKTN 443

Query: 448 DGSDDLLNPSKGFRLGGRLSPELSFQGSTFGYAKAQVDASAYQPINDRVVLAGRTRLGTI 507
            G D  L+P  GF     L       GS     + Q          D+     R  LG  
Sbjct: 444 RG-DKSLDPKSGFFQYYSLEHADPSLGSDLRLTRLQAKFKWIDTFFDKHRFVSRLDLGAN 502

Query: 508 LGSTVD--RIAPSRRFYAGGGASVRGYGYQAIGP--RYGPDDDP-----VGGKSLIEFSA 558
           L S  D   + PS R++AGG  S+RGY YQ +GP   Y    D      VGG+ L+  S 
Sbjct: 503 LVSEEDLPMVPPSLRYFAGGDQSIRGYSYQELGPYIEYTNSQDQLARMVVGGRYLMVGSL 562

Query: 559 EARIRF-GNFGVVPFLDAGNISTTFLPRFRDLRVGTGLGVRYYSSFGPIRVDVGTPI-NP 616
           E +      + +  F+DAGN       +F  + V  G GV + S  GPI++D+G  +   
Sbjct: 563 EYQYYLTPTWRLATFVDAGNAFDN--QQFEPI-VSVGGGVHWISPIGPIKLDLGVGLKET 619

Query: 617 QPGDAKVAVYVSLG 630
           +  D    +++++G
Sbjct: 620 ETVDRSWRIHITMG 633