Pairwise Alignments

Query, 372 a.a., L,D-transpeptidase from Sphingobium sp. HT1-2

Subject, 454 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  182 bits (463), Expect = 1e-50
 Identities = 114/305 (37%), Positives = 159/305 (52%), Gaps = 37/305 (12%)

Query: 73  QLLQAQVALDRWGFSPGVIDGKDGMSFKAALRGFQEANKLPVTGD-YDQKTAAALLE--- 128
           ++   QV LDR GFSPGVIDGK G +   A+  +Q+A     TG+  D      +LE   
Sbjct: 178 EIAALQVFLDREGFSPGVIDGKMGSNVTKAIEAWQQA-----TGETLDPNNTEDILERLR 232

Query: 129 --GEAKPTTWLVRIPNGFARGPFF-DIPKGLNNQASLPALTYRNLLEKLAERFHTTPEVL 185
             G    TT+ +   +  A GPF   IP+   ++A LP L++ ++ E L E+FH     L
Sbjct: 233 FNGGLPITTYTITAAD--AAGPFVASIPEDYAHKAQLPHLSFTSVTEMLGEKFHMDEAYL 290

Query: 186 TGMNPPDTKVAAGATIRVPAIANQPVARIEGDERGWGETLASLGVAKDQPQADHLVVDKS 245
             +NP       G TI+V      P    +G                   +   +V DK+
Sbjct: 291 RELNPGVDFSIPGTTIKVV----NPGPNKKG-------------------KVARIVADKA 327

Query: 246 EGLLKVYGADNRLIAQFPVTTGSQHDPLPLGEWTIKGVSRNPDFHYNPDLFWDAASKDQK 305
              +  Y    +LIA +P T GS   P P G   ++ ++ +P + YNP + +   + D+ 
Sbjct: 328 RKQVLAYDEAGKLIAAYPSTIGSSDTPSPSGTVHVERIAFDPGYTYNPKINFQQGANDRI 387

Query: 306 AVLKPGPNGPVGVVWIDLSKDHYGIHGTPEPQLIGRTESHGCIRLTNWDAARLAQMVKSG 365
             L+PGPNGPVG VWI LSK  YGIHGTPEP  IG+T+SHGC+RLTNWDA  L +MV +G
Sbjct: 388 LQLQPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGKTQSHGCVRLTNWDATELGKMVSTG 447

Query: 366 VKAKF 370
           V  +F
Sbjct: 448 VTVEF 452