Pairwise Alignments

Query, 372 a.a., L,D-transpeptidase from Sphingobium sp. HT1-2

Subject, 327 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  194 bits (494), Expect = 2e-54
 Identities = 125/347 (36%), Positives = 175/347 (50%), Gaps = 41/347 (11%)

Query: 25  STTDANESQPAAPTNQTPINQTQAAPDPSAAYAFQVVEEPGGKPWQPNQ-LLQAQVALDR 83
           ST  A   QP A  N         AP  S A      E P  +P  P+  ++  Q+ LDR
Sbjct: 19  STASAEGLQPEAINN---------APIASIA-----PERPPKEPPHPDPAIVHLQILLDR 64

Query: 84  WGFSPGVIDGKDGMSFKAALRGFQEANKLPVTGDYDQKTAAALLEGEAKPTTWLVRIPNG 143
            G SPGVIDG  G +   A+ G++   +LPV G  D +  + L + +  P      I   
Sbjct: 65  AGSSPGVIDGYYGENVTKAVAGYEAMQRLPVDGKLDPEVFSRLPQDQ--PVIQSYAITEE 122

Query: 144 FARGPFFDIPKGLNNQASLPALTYRNLLEKLAERFHTTPEVLTGMNPPDTKVAAGATIRV 203
            A+    +IP   + QA +  L Y ++ E+L+ERFH   ++L  +NP  +  A G T+ V
Sbjct: 123 DAKDLVDEIPDDYSKQAKMDHLGYTSVEERLSERFHMDLDLLKALNP-GSSFAVGETVWV 181

Query: 204 PAIANQPVARIEGDERGWGETLASLGVAKDQPQADHLVVDKSEGLLKVYGADNRLIAQFP 263
                +P A  EG+ +                    + V K  G +  +  D   +A +P
Sbjct: 182 A----KPGAAKEGEVK-------------------RIEVRKRAGQVLAFAEDGSPLAAYP 218

Query: 264 VTTGSQHDPLPLGEWTIKGVSRNPDFHYNPDLFWDAASKDQKAVLKPGPNGPVGVVWIDL 323
            + GS+  P P G   +KGV+R P + Y+PD+ +     D+   L  GPN PVG VWIDL
Sbjct: 219 ASIGSEGSPSPTGTHKVKGVARMPPYEYDPDVNFKQGDNDEALTLPKGPNNPVGTVWIDL 278

Query: 324 SKDHYGIHGTPEPQLIGRTESHGCIRLTNWDAARLAQMVKSGVKAKF 370
           ++  YGIHGTPEP LI + +SHGC+RLTNWDA  LA MVK GV A+F
Sbjct: 279 TEPTYGIHGTPEPSLIDKAQSHGCVRLTNWDAEELAAMVKPGVVAEF 325