Pairwise Alignments

Query, 411 a.a., NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) from Sphingobium sp. HT1-2

Subject, 394 a.a., NAD(P)H-quinone oxidoreductase subunit H from Synechococcus elongatus PCC 7942

 Score =  296 bits (758), Expect = 7e-85
 Identities = 158/393 (40%), Positives = 238/393 (60%), Gaps = 5/393 (1%)

Query: 21  DTEIQNYTINFGPQHPAAHGVLRLVMELDGEIVERCDPHVGLLHRGTEKLIEHKTYMQAL 80
           +T  +   +N GP HP+ HGVLRL++ LDGE V  C+P +G LHRG EK+ E+++ +  +
Sbjct: 5   ETRTEPMVLNMGPHHPSMHGVLRLIVTLDGENVIDCEPVIGYLHRGMEKIAENRSNVMFV 64

Query: 81  PYFDRLDYCSPLGMEHSYVLAVEKLLNLEVPLRAQYLRVFFAELTRICNHMLNLGSHVMD 140
           PY  R DY + +  E   V A EKL N+ VP RA Y+RV   EL RI NH+L LG  + D
Sbjct: 65  PYVSRWDYAAGMFNEAITVNAPEKLANIPVPKRASYIRVIMLELNRIANHLLWLGPFLAD 124

Query: 141 VGAMTPNLWLFEIREDCLNFFERASGARM-HSAYFRPGGVHQDVPLKLLTDIADWLDTRL 199
           VGA TP  ++F  RE   + +E A+G R+ ++ YFR GGV  D+P   L    D+ D   
Sbjct: 125 VGAQTPFFYIFRERELIYDLWEAATGQRLINNNYFRIGGVAADLPYGWLEKCIDFCDYFQ 184

Query: 200 PRLFEDAMSLVVDNRIFKQRNVDISIVSKEDALKWGFSGPMLRGSGIAWDIRKAQPYDVY 259
            ++ ++   L+ DN IF++R   I ++S+E+AL W  SGPMLRGSG+ WD+R+   Y+ Y
Sbjct: 185 AKV-DEYERLITDNPIFRRRVEGIGVISREEALNWSLSGPMLRGSGVKWDLRRVDHYECY 243

Query: 260 DRMEFDVPVGTAFDCYDRFMVRVEEVRQSARIMKQCLSEMPEGPIASFD-RKVSPPKRGE 318
           D  ++DV      DC+ R+ VRV+E+R+S +I++Q  + +P GP  + + R+++  K+ E
Sbjct: 244 DDFDWDVITAEEGDCFARYRVRVQEMRESLKIIRQACAGIPGGPYENLEARRMAEGKKSE 303

Query: 319 MKKSMEALIHHFKLYTEGFHVPAGEVYVATESPKGEFGVYLVSDGSNKPYRCKIRPTAFS 378
                   +   K     F +PAGE YV  ES KGE GV++       P+R KIR   F+
Sbjct: 304 WYGPDYQYVS--KKVAPTFKIPAGEHYVRLESGKGELGVFIQGADDICPWRFKIRAPDFN 361

Query: 379 HLQAMDFMMKGHMLADTTAVLGAMDIVFGECDR 411
           +LQ +  +++G  +AD  A+LG++D++ G  DR
Sbjct: 362 NLQILPQLLQGVKVADIMAILGSIDVIMGSVDR 394