Pairwise Alignments

Query, 478 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Sphingobium sp. HT1-2

Subject, 487 a.a., Proton-translocating NADH-quinone oxidoreductase, chain N (NCBI) from Rhodospirillum rubrum S1H

 Score =  439 bits (1129), Expect = e-127
 Identities = 242/473 (51%), Positives = 317/473 (67%), Gaps = 6/473 (1%)

Query: 11  LPELILTGSGLVLMLIAAFGGDRSTHAVNWLAVLALLAA--GLSLCTSMAHGPVAFDGLV 68
           LPE++L   GLVL+++  F    ST  V  LAV  LL A   + L  +     +AF GL 
Sbjct: 12  LPEILLAVLGLVLLMVGVFRKTDSTGLVGLLAVYGLLMALAVVGLGAAPETPQLAFGGLF 71

Query: 69  RADAFSVYAKALIYGAAGAAILLAPRFFATGGALRPEYAVLIVFAAIGMGMMVSAGDMLT 128
             D F+ YAKAL    A   +LL+  +       R E+ +L++FA IGM MM+SA D++ 
Sbjct: 72  IDDGFARYAKALTLLGAVLTLLLSMVWLKRENEGRFEFPILVLFATIGMMMMISANDLIA 131

Query: 129 LYVGLEMNSLASYVLASFMRQDEKSSEAGLKYFVLGSLASGILLYGISLLYGFTGSTAFD 188
           LY+GLE+ SLA YV+A++ R + KS+EAGLKYFVLG+LASG+LLYG+SL+YGF G+T FD
Sbjct: 132 LYMGLELQSLALYVIAAYQRDNLKSTEAGLKYFVLGALASGLLLYGMSLVYGFAGTTRFD 191

Query: 189 GIA--IAMGDGVSKGELFGLVFVLAGLAFKISAVPFHMWTPDVYEGAPTPVTAFFGSAPK 246
           G+A   A   G+S G L G+VF++AGLAFK+SAVPFHMW PDVYEGAPTPVTAFF  APK
Sbjct: 192 GLAQVAAAEGGISTGLLIGIVFIIAGLAFKVSAVPFHMWAPDVYEGAPTPVTAFFAVAPK 251

Query: 247 VAAMGLMVRVAIEALGPAGLDWQQIIIFVALASILFGAVAAIGQTSIKRLMAYSSINNVG 306
           +AA+ L  RV +         WQQ+II +++ S+L G  AAI QT+IKRLMAYSSI +VG
Sbjct: 252 IAALTLFARVMMGPFAAYADQWQQVIILISILSMLLGGFAAIVQTNIKRLMAYSSIGHVG 311

Query: 307 FALVGLAAGTPAGVAATMSYMAIYVVMTIGAFACILQMRDADGKPVDTIASLAGLSQSRK 366
           +AL+G+AAGT  GV   + Y+AIY+ M +G F  IL MR   G+ V+ I  LAGLS+   
Sbjct: 312 YALIGIAAGTTEGVRGVLVYLAIYLFMNVGTFTVILAMRQ-KGRAVEGINDLAGLSKQHP 370

Query: 367 GLSAAFAIFMFSMAGIPPLFGFWAKFLVFDAAVAANLTALAAFGIAMSVIGAFYYLKIIK 426
            ++AA A+FMFSMAG+PPL GF+ KF VF AAV + L ALA  G+  SV+ AFYYL+IIK
Sbjct: 371 MMAAAMAVFMFSMAGVPPLAGFFGKFYVFMAAVNSGLFALAVIGVLSSVVAAFYYLRIIK 430

Query: 427 TIYFDEPAAPYEAKGGAVENIIMAACAIVIVFGYLL-NPLLDKASAAAAASLF 478
            +YFDE   P +A  G    +I+   A V+   +L  + ++D A AAA A  F
Sbjct: 431 LMYFDEATEPLDALSGTTMKVILIGTAAVVALFFLAPSVVVDGAQAAAEALTF 483