Pairwise Alignments

Query, 629 a.a., DNA primase DnaG from Sphingobium sp. HT1-2

Subject, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

 Score =  322 bits (824), Expect = 4e-92
 Identities = 185/423 (43%), Positives = 250/423 (59%), Gaps = 20/423 (4%)

Query: 7   WLDELRARTSLSTLIGKTVKVQKAGREYKACCPFHNEKTPSFTINDEKGFYHCFGCGAHG 66
           ++D+L AR  +  +I   VK++K G+ Y ACCPFHNEKTPSF+++ EK FYHCFGCGAHG
Sbjct: 9   FIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAHG 68

Query: 67  DAIRWMTDQRGLPFMEAVKELAATAGMEV---------PAADPRAAKRAEQAKGLHDAMG 117
           +AI ++ +   + F EA++ELA+T G+EV         P A    A ++E  + L+D MG
Sbjct: 69  NAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDLMG 128

Query: 118 AAQSFFEDQLGGIDGGDARAYLAKRGISDATRRTFGFGYSPDSRGKLKGALKEFG----- 172
           +   F+  QL       A  YL  RG+S    + FG GY  D    ++   + FG     
Sbjct: 129 SIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVR---RNFGQQRSS 185

Query: 173 EPMLVEAGLLIDPDGERDTYDRFRGRLMLPIRDIRGRVIAFGGRIIGQGEPKYLNSPDTP 232
           E MLV AG+LI+ D  R  YDRFRGR+M PIRD RGRVI FGGRI  QG PKYLNSP+TP
Sbjct: 186 EDMLVTAGMLIENDNGR-RYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNSPETP 244

Query: 233 LFDKGRTLYNIDRASPASRQSGRVIVVEGYMDVIALAQAGFGDSVAPLGTALTEHQIERL 292
           +F KG+ LY +     A R+  +++VVEGYMDV+ALAQ G   SVA LGT+ T   ++ L
Sbjct: 245 IFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQLL 304

Query: 293 WKMVEVPILCFDGDAAGQKAAIRAATRALPLLRPGHSLAFATLPAGQDPDDLLRAEGPRA 352
           ++     I C+DGD AG+ AA RA   AL  L+ G+ L F  LP G+DPD  +R  G   
Sbjct: 305 FRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYGKAD 364

Query: 353 MDAVLAGAQPLVDRLWEH--EQKVGPLDTPEQKAALKQRLAAHSDSIQHPDVRALYAQAF 410
            +  +A A PL   L+E+  E     L + E K+AL+       D I  P ++ +  +  
Sbjct: 365 FEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEILEKLL 424

Query: 411 RER 413
            ER
Sbjct: 425 DER 427