Pairwise Alignments

Query, 392 a.a., Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) from Sphingobium sp. HT1-2

Subject, 191 a.a., aminodeoxychorismate synthase, glutamine amidotransferase subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 13/140 (9%)

Query: 238 QVKALNPDGVFLSNGPGDPAATGDYAVPVIQQVLAADIPVFGICLGHQLLGLAVGAKTIK 297
           +++AL P  + +S GP  P   G     +  +  A  +P+ G+CLGHQ +    GAK ++
Sbjct: 38  EIEALAPSHLVISPGPCSPNEAGISLAAI--EHFADRLPILGVCLGHQAMAQVFGAKVVR 95

Query: 298 ----MHQGHRGANHPVKRLSDGLVEITSMNHGFAVDVDTLPANARSTHVSLFDGSNCGIE 353
               MH       H  +RL  GL +  ++    ++ VD +P        + FD    G E
Sbjct: 96  AQRVMHGKVSTIGHTGERLFKGLNQPLTVTRYHSLLVDAIPEG--FVLDAWFDDPTHGRE 153

Query: 354 LTDKS-----AFSVQYHPEA 368
           +   S      F VQ+HPE+
Sbjct: 154 IMAMSHKQLPLFGVQFHPES 173