Pairwise Alignments

Query, 308 a.a., tRNA dimethylallyltransferase (EC 2.5.1.75) from Sphingobium sp. HT1-2

Subject, 315 a.a., tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (446), Expect = 6e-49
 Identities = 114/286 (39%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 8   PVAL-IAGPTASGKSALAVRLAQIADGVVINADASQVYADLAILSARPSAEEMGGVPHRL 66
           P+AL + GPTASGK+ LA+RL Q     +I+ D++ +Y  + I +A+P A+E+   PHRL
Sbjct: 6   PLALFLMGPTASGKTDLAIRLRQKYPVEIISVDSALIYRGMDIGTAKPDAQELALAPHRL 65

Query: 67  FGHIDGAEACSAARWATEARAEIDAAHAAGKLPVLVGGTGLYIRTLLDGIAPVPEIDADI 126
              +D +EA SAA +  +A  E+    A GK+P+LVGGT LY + LL+G++P+P  D  I
Sbjct: 66  IDILDPSEAYSAADFRRDALKEMADIVAQGKIPLLVGGTMLYFKALLEGLSPLPAADPVI 125

Query: 127 RAAV----RAMPVTQAHEALRSEDPEAAARLAPADTTRVARALEVVRSTGKPLKIWQQHK 182
           R  +      +     H+ L+  DP +A R+ P D  R++RALEV R +GK L    Q K
Sbjct: 126 RQQIELEAEKLGWQALHDQLQQIDPVSAQRIHPNDPQRLSRALEVYRISGKTLTELTQTK 185

Query: 183 QGGIADRISLSPMILLPPRDWLIERCDRRFELMIDQGAVAEVEALLPR-NLNPDLPVMRA 241
              I  R+ L   I    R  L  R + RFE M++ G   EV+AL  R +L+PDLP +R 
Sbjct: 186 GEAIPYRV-LQFAIAPKERAELHRRIELRFEKMVESGFEEEVKALYARDDLHPDLPSIRC 244

Query: 242 IGVPEIAAWLKGDIDRDTMMARGQLATRQYAKRQYTWFSNQPPQDW 287
           +G  ++  +L G    D  + RG  ATRQ AKRQ TW  +     W
Sbjct: 245 VGYRQMWDYLDGHGTLDEAIYRGICATRQLAKRQITWLRSWDDLTW 290