Pairwise Alignments

Query, 497 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 472 a.a., peptidoglycan binding domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  138 bits (348), Expect = 4e-37
 Identities = 97/318 (30%), Positives = 148/318 (46%), Gaps = 29/318 (9%)

Query: 199 LRPGGSSGEIAILRHRLGLPDGVD---------YDKALAAKVKLFQADHGLDADGIAGAQ 249
           LRPG S  E+  +  RL L   ++         YD  +A  VK FQ  HGL  D + G +
Sbjct: 150 LRPGDSHTEVVAIAKRLWLLGDMETEPGYALSRYDDEVAQGVKAFQHRHGLKQDAVIGPK 209

Query: 250 TIEALNRGP----GYFARILQLNLERARLLPGPWVRHVEVDAASARLYYYSGGELDGSMK 305
           T+  LN  P       AR   L     + LP  +V    V+  +  L     GE     +
Sbjct: 210 TLYWLNLAPDTRAARLARDYLLQSRERQTLPSTYVL---VNIPAFDLELVDDGEALMHSR 266

Query: 306 VVAGAKESQTPMMAGMIRYATLNPYWNVPPDLVERKIAPKIL-DGATLRKMRYEALSDWT 364
           V+ G    +TP +   I    +NP W VP  L+   + PK+  DG+ L +  +     W+
Sbjct: 267 VIVGKPSRKTPFIQSEISAVVVNPSWRVPRRLMRLDVLPKVRKDGSYLSRKGFIV---WS 323

Query: 365 ADAQTLNQSEIDWQAVAAGQRELRVRQLPGGNNAMGKIKFMFPNDLGIYLHDTPDRALFA 424
            + + + +++  +Q+ AAG+    + Q PG +NA+G+ K  F N+  +YLHDTPD+ LF 
Sbjct: 324 REGEEVKETDDFFQSAAAGKFPYLLEQRPGPDNALGRFKLHFANEDNVYLHDTPDKHLFD 383

Query: 425 KPVRHFSNGCVRLEDAQRLGRWFFGK--------TPTAESDAPEQYVPLPRPVPVYLTYL 476
           +P+R  S+GCVR+E    L  W              T ++    ++  L   +PV+  Y 
Sbjct: 384 EPMRALSSGCVRVEKINELSAWLANGRLADPRRWQQTLQTPQTTRWFTLKERLPVHFVYW 443

Query: 477 TVVPTADG-VQFLPDDYG 493
           T    A+G  QF  D YG
Sbjct: 444 TSWVDAEGKAQFREDIYG 461