Pairwise Alignments

Query, 814 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

 Score = 49.3 bits (116), Expect = 8e-10
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 21/163 (12%)

Query: 108 SPTPAAVVQL-----APVVQEPP--ADIIVTASKRDIPLPRYAGMVETVTGGLFETADAA 160
           SP  AAV+ +     A    EP    +++VTA++ + PL   AG V  + G   E     
Sbjct: 4   SPVSAAVLSVLAAGFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEK---- 59

Query: 161 QGTAAL---LSRVASLSSTHAGAGR-NKLFIRAIADSGVA---GPTQATTGQYLGDMRLN 213
           QG   L   L++   +S T  GAGR   + IR +  + +A      Q+  G    D+   
Sbjct: 60  QGKTELYDALNQEPGVSVT-GGAGRPQNITIRGMTGNRIAIVRDGIQSADGYGAADINDK 118

Query: 214 YAAPDPDLRLYDVGGVEVLEGPQGTLYGAGSLGGIIRIIPNAP 256
           Y        L +V  ++V++G   TLYG+G++GG++ I   AP
Sbjct: 119 YGRNT--FSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAP 159