Pairwise Alignments

Query, 173 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 168 a.a., RNA polymerase sigma-54 factor RpoN from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (255), Expect = 3e-27
 Identities = 69/163 (42%), Positives = 92/163 (56%), Gaps = 4/163 (2%)

Query: 10  DLLPALMRYARRLTGNESDAEDLVQDALVRAYANADSYQRGRPLRVWLFSILHNVFVSGT 69
           +L+P L R+A  LT N S+A+DLVQ  L RA +  +  +    LR WLFSIL+  F+   
Sbjct: 10  ELIPRLRRFAVSLTRNPSNADDLVQMCLERALSKWNDKRPDGDLRAWLFSILYRQFLDSH 69

Query: 70  RRAAVRERFRADAVAQAEPVAAPAQEQMVRLHQIEAALTALPEEQQTVLHLVAVEGLSYQ 129
           RR+  R   R          A P+ E+ V       A   L  EQ+ +L  V+VEGLSYQ
Sbjct: 70  RRS--RRYARMLEFFTGRDDAHPSAERSVIAQSSLQAFDQLTTEQRALLLWVSVEGLSYQ 127

Query: 130 DAADAIGIPIGTLISRLSRARAKLRALEEGASAVRPGHLRIVR 172
             AD +G+P GT++SRLSRAR  LR L +G    RP  LRI++
Sbjct: 128 QIADILGVPTGTVMSRLSRARQALRQLSDG-EVTRP-TLRILK 168