Pairwise Alignments

Query, 173 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score =  103 bits (257), Expect = 2e-27
 Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 9/164 (5%)

Query: 1   MKPTSPKVVDLLPALMRYARRLTGNESDAEDLVQDALVRAYANADSYQRGRPLRVWLFSI 60
           +K    +++  LP L R+A  L G+   A+DLVQ A  RA A+A+ ++ G     W+F I
Sbjct: 5   VKDVGERLMAFLPNLRRFAISLCGSRDVADDLVQSACERALASAERFEPGTRFDAWIFRI 64

Query: 61  LHNVFVSGTRRAAVRERFRADAVAQAEPVAAPAQEQ----MVRLHQIEAALTALPEEQQT 116
           L N+++   RR   +     D + +   +A  + E+     + L  +  A+T LP+EQ+ 
Sbjct: 65  LRNLWIDQVRRQ--KTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQRE 122

Query: 117 VLHLVAVEGLSYQDAADAIGIPIGTLISRLSRARAKLRALEEGA 160
           V+ LV VE LSY++AAD +GIPIGT++SRL RAR   R+L E A
Sbjct: 123 VVLLVCVEELSYREAADVMGIPIGTVMSRLMRAR---RSLAEAA 163