Pairwise Alignments

Query, 541 a.a., Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site from Sphingobium sp. HT1-2

Subject, 529 a.a., glucose-methanol-choline oxidoreductase (RefSeq) from Shewanella loihica PV-4

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 124/577 (21%), Positives = 211/577 (36%), Gaps = 121/577 (20%)

Query: 3   IDLSQQTGALRRRADVCVIGAGAAGITTARRLLAAGHQVLLLESGGLDYERETADLNAGK 62
           ID SQ T      ADV ++G+GA G   A  +  AG  V+++E G L    E+ ++   +
Sbjct: 18  IDASQLTQDQTLEADVVIVGSGAGGGVAAEIMTEAGLSVIIIEGGPLK-SSESFNMEERR 76

Query: 63  NVGQTYYDLDDARLRFFGGTTAIWGGRCATLDPIDLQRRDWVAGSGWPLSWDELQDYYGQ 122
                Y     A ++       I+ GR                G    ++W         
Sbjct: 77  AYPNLYQQA--ASMKTKDKAIGIFQGRAV--------------GGSTTINWTTSIRTPEN 120

Query: 123 ARGIFEIGDEPASADALSAHGVPLPGFDRSELHMPV--WNFDPRFNRFTF-DACQDL--- 176
           A   +    E  S + LS   +  P F++ E  + +  W F+P  N       C+ L   
Sbjct: 121 ALAFWA---EHKSVEGLSREALT-PWFEKMEQRLSITKWPFEPNRNNMALKQGCEALGWD 176

Query: 177 -----RDHPRC-------------------------------EIITHASVTRIVTRDGAI 200
                R+   C                                +++ A V++I   +  +
Sbjct: 177 YTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPAALDRGATLVSRAKVSKIEHHNDKV 236

Query: 201 SRIEAKAL------AGAHLHVEARAFVLAAGGIENARLLLASNIGNERDQVGRHFMEHPH 254
             ++A+AL      +G  L ++A+ ++L+AG I    L++ S + + +  +G+    HP 
Sbjct: 237 YALKAQALTESLRPSGVQLMLKAKHYILSAGAIHTPALMMRSRLPDPQKLLGKRTFLHPT 296

Query: 255 ARGGRIVDAKAWPLLKAFGRRHRISGHDMAALITPSADLQQREGLLNSSLTIVGRQPARA 314
              G + +               I+GH  A                         Q   +
Sbjct: 297 VLSGALFN-------------DAINGHSGAP------------------------QSIYS 319

Query: 315 SQF-WGMRAYGSL--KHDMSPTRSGRRLWMMTKKAATWAQRHVDPLRPWLLHKAGKLE-- 369
            QF W   A G L  K ++ P        ++  K+  + Q H +     L+ +  +L+  
Sbjct: 320 DQFVWQDGADGELGYKLEVPPIHPV----LIASKSLGYGQSHAE-----LMAQFNQLQVT 370

Query: 370 IALLVRAEQAPNPDSRVLLTKERDALGVPRVALDWRLSAIDKHSVTGLVDGLG-RELKRL 428
           IAL+     A +P  +VLLT +   L  P     WR +     S+  L    G +++  +
Sbjct: 371 IALMRDGYHADSPGGQVLLTDKGYTLDYPLTDAFWRAARRAFASMAELQFAAGAQKVLPM 430

Query: 429 GMGRVERADWLDEPGELWRNDPLISSHAIGGYHHMGTTRMATDPRQGVVDADGRVHGQAN 488
             G      W      +           +   H MG   +  D +  +VD+ GR H   N
Sbjct: 431 SEGMPYLPSWQAAKEAIADMTLAPFKTVVASAHVMGGCPLGEDKQMAMVDSRGRSHYLEN 490

Query: 489 LYVVGSSIFPTSSWANPTLTIAALALRTADRLSVALN 525
           L V+  S+FPTS  ANP L+I  +  R A  L+  L+
Sbjct: 491 LSVMDGSLFPTSLGANPQLSIYGITARNASLLAEELS 527