Pairwise Alignments

Query, 1042 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 922 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score =  213 bits (542), Expect = 5e-59
 Identities = 248/1052 (23%), Positives = 422/1052 (40%), Gaps = 181/1052 (17%)

Query: 28   LAMAGVMLMSASAIAQTNDEGEKKEGAVSAADIVVVGTRASLQSAINRKKEANTVVDSIV 87
            LA++  + +S  A AQ   +    E AV    + V G RAS++ A++ K+    VVD+IV
Sbjct: 15   LALSIGLALSGHAAAQDAAQ-TPAEPAVDLDTVTVTGYRASVEKALDIKRGEAGVVDAIV 73

Query: 88   ADDIASFPDKNIGDSLARITGVQLSRDFGEGTQISIRGVEPDLNRVEINGVSQVSATGT- 146
            A+DI  FPD N+ +SL RI GV ++R+ GEG  IS+RG+ P+  RV ING+  ++  G  
Sbjct: 74   AEDIGKFPDLNLAESLQRIPGVVITREAGEGRAISVRGLGPEFTRVRINGMEALTTVGAG 133

Query: 147  ---------RAGDFREIAAELVKSIDVYKGYAVDLTEGGIGGTVRVETRKPLELKDPLIS 197
                     R  DF   A++L   +   K  + D+ EG +G TV + T +P +      +
Sbjct: 134  DQSGGTNRGRGFDFNVFASDLFSQLIARKTASADVEEGSLGATVDLRTARPFDYSG--FT 191

Query: 198  MVASGQ--HLDLTETWKPRLTFFAGAPKFLIDGLGVLVNATYSDVDTRQDYISNTNWQRL 255
              ASGQ  +  + E   PR+     +  +  +  G L++  Y++ +  ++  +   W   
Sbjct: 192  FAASGQAGYNAMAEKANPRVAALI-SNTWADNTFGALLSVAYTEREVLEEGSNTGRWAN- 249

Query: 256  ADFDHSTEKTVANPLYDNYTSYESCAGVGGATTAAATANRLACETQFFDWAPTVPRYRQW 315
                         P    +++    A    A                  + P  PRY Q 
Sbjct: 250  ------------GPSNGGFSATSPFAAARSADV----------------YHPRFPRYTQQ 281

Query: 316  VRNDKRISADVTLQYQVAPNFRAYVNGQINLRNQNLQDTNYS-VDLGRIERFNLDPQLAA 374
            + + +R+    +LQ++  P+ R  ++           D  YS +D  R E +      + 
Sbjct: 282  IHDQQRLGVTGSLQWK--PSDRTTLS----------LDMLYSKIDAKRDEHYIEAISFSR 329

Query: 375  GLNGA---TSRRRVQLGTSTVNANHVVTGLTTALDAVNVGSA-ANPNWNGAANIIGVQRR 430
            G N       +    +    +  N +V G     D V++ +   +  WN        + +
Sbjct: 330  GGNARPVLVGKPATVVRNGEIRNNALVYG---EFDNVDIRTENRHDEWN-------TEFK 379

Query: 431  DFSYDQNSKYFSGGFSWEPSDRLKIDVMASHATAHTDQQTNLISLGTSVSGITIDRNNEQ 490
              S+D   + FS  FS      +   +  S +      QT +I     V G + D     
Sbjct: 380  QISFDVEHR-FSDDFS------MNARIGTSRSAHENPVQTTIIMDKYDVDGYSYDYRGNN 432

Query: 491  GVPVFSFPSNFDPADPSVYADFTRTGANGQVLPVYGPALQYRPGEFNNSEDQFKVDIDWE 550
              PV ++  N  P DP+           G  L      ++ RP   +N  D  ++D +W 
Sbjct: 433  RAPVLNYGIN--PTDPT-----------GWELA----EIRLRPQTVDNDFDTGQIDFNWN 475

Query: 551  IDHPIVSKIEFGAQGRKQKFLNYAGGGSVLLDPTTMTYQSSANVSYTTNIVDNPAQVRNG 610
            I      +++ G   +   F             +T+  + +  +S  T          NG
Sbjct: 476  ISPGF--RLKGGVLAKNYTF-------------STVELRRANELSVPT--------FANG 512

Query: 611  NTWYMTPAQYTALIGAIGGVSGGADLFTGLKNAPSGIPSRIAFPNFNA-EELAKFYDLSG 669
                + PA  T   G + G++G               P+    PN +A  +    Y  SG
Sbjct: 513  TR--IVPADLTEQAG-LKGINGS--------------PAAWVVPNLDAVADQFGIYSNSG 555

Query: 670  FDHDLVREADGFPQVPSAKVDETVLSGYVMADVDTEIFGMRLTGNGGIRWTHTKDTGLGT 729
                  R  +      S  V+E     ++M +  T++  +  +GN G+R+  T+    G 
Sbjct: 556  TFAVAPRVNN------SRSVEEKDRGVWLMGEFSTDLGSIPFSGNFGVRYVRTEQESTGY 609

Query: 730  NVSRVTRFNSTGGTETVVLAAQAVTISNTYTDILPAFNANLELARDLFLRANWAKNLARP 789
             +              +  A    T+   Y + LP+FN   ELA DL LR   AK ++RP
Sbjct: 610  AL--------------INNAPALTTVGRKYNNTLPSFNLVAELAPDLLLRLGAAKVMSRP 655

Query: 790  RPTDLVPNINCLDDTTITGADDTCTAGNPDLKPYRADQWEVNLAWYPNADTMLSLGYWKK 849
                L P +       + G   T   GNPDL P  A   ++ L WY N   M+ +G + K
Sbjct: 656  GLGSLTPGVT----VAVAGGARTVAGGNPDLDPIEATNVDLGLEWYFNEGAMVGVGLFYK 711

Query: 850  YESSFV-----IPNVTRSGVDL-FKDGTTYTVRQ------PVNGFGALLDGIEANAQTAF 897
               SF+     +   + SG+     +GT  +V        P+N  G  L G+EAN    F
Sbjct: 712  DIESFIQTAREVRPYSSSGLPASLLEGTGASVNDDFAFSIPLNTPGGELKGVEANYVQPF 771

Query: 898  TFLPKPFDGFGASANFSYSRALRTNLTNSATGTELKEYPGMSKYTYNASFFYDKDWLNFR 957
            TFLP  +   G   N+++  +    L +S       +  G+S+ ++NA+ FY+ D    R
Sbjct: 772  TFLPGKWANLGVQLNYTWVDSQIQYLASSGAPVMKNDLLGLSRSSWNATLFYEGDTFAGR 831

Query: 958  LSYNYRSKWMQTVIDSNNGNN---PLYRKGEGYLDGKITFRFPQYHFSVFIEGQNLNKEF 1014
            +S   R  ++     +  G N        G   LD  + ++  +    + +EG NL  E 
Sbjct: 832  ISATNRDDYLTQAPGAEAGFNVDGVHGMTGTTILDASLRYKISK-QLELSLEGINLTNEA 890

Query: 1015 SKLYINEDMSVDLTY----PGQRFFIGVQGKF 1042
            S  +++   +  L       G+++ +G++ KF
Sbjct: 891  SDEWVSSPRTGQLPLQYGETGRQYLLGLRYKF 922