Pairwise Alignments

Query, 286 a.a., Ku domain protein from Sphingobium sp. HT1-2

Subject, 268 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  167 bits (423), Expect = 2e-46
 Identities = 94/268 (35%), Positives = 150/268 (55%), Gaps = 5/268 (1%)

Query: 1   MPARAFWQGQIKLALVSIPVEIYPATKSGAAVSFRQIHEPTGKPI--HYDKVVTGVGPVD 58
           M  R +W+G +KL+LV+ PV++ PAT     V F  ++  T   +  HY   VTG   V 
Sbjct: 1   MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTQNRVVSHYVDSVTGK-EVK 59

Query: 59  PEEILKGFEISKGNYVLLEQDEIEAVKIESRKTLDLVQFVEADAIDVLYYEKPYFVVPAD 118
            E+ +KG++  +  YV+LE +E+E V +ES KT+D+  F   D+I+ ++ + PY + P D
Sbjct: 60  EEDEVKGYQRGEHEYVILEDEELENVALESTKTIDISTFTPRDSIEWIWLDTPYCLSPND 119

Query: 119 DLAEEAYAVLRDALRQTRKVGLGQLSVRGREQLVSLKPCGRGMVLEVLRYADEVTKAQTY 178
            + +EA++V+RDA+     VG+ +L +  RE+ V L+P G+G+VL  LRY DEV    +Y
Sbjct: 120 PVGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDSY 179

Query: 179 FRGLPDDTADEDMLDLAVSIIDKRTAPFNPEEFHDRYVDALHRLIDKKKKAKGKRIIEEV 238
           F  + D+ AD +M+ L   +I K+T  + P+   D   + L  +I  KKKA   +  +  
Sbjct: 180 FEAIGDEQADSEMMPLVQQLIKKQTKDWTPKMVADPVQERLLEIIAAKKKALKPQ--KAQ 237

Query: 239 DDEPTDRKAGNVIDLMAALKKSAGEAGR 266
                     NV+ +M AL+KS     R
Sbjct: 238 GKTAPSSSPSNVVSIMDALRKSVAAEKR 265