Pairwise Alignments

Query, 286 a.a., Ku domain protein from Sphingobium sp. HT1-2

Subject, 272 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  190 bits (482), Expect = 3e-53
 Identities = 99/274 (36%), Positives = 167/274 (60%), Gaps = 7/274 (2%)

Query: 2   PARAFWQGQIKLALVSIPVEIYPATKSGAAVSFRQIHEPTGKPI--HYDKVVTGVGPVDP 59
           P R +W+G +KL+LV+ PV + PAT     V F  ++  +   +   Y   VTG   VD 
Sbjct: 3   PPRPYWKGYLKLSLVTCPVSMMPATSESEKVRFHTLNRKSNNRVVSRYVDAVTGK-EVDE 61

Query: 60  EEILKGFEISKGNYVLLEQDEIEAVKIESRKTLDLVQFVEADAIDVLYYEKPYFVVPADD 119
           ++ +KG+E  + +++++E +E+E+V +ES +T+D+ +FV  D I+ ++ EKP+++ P+D+
Sbjct: 62  DDEVKGYERGENDFLVIEDEELESVALESARTIDIEKFVPRDTIEWIWLEKPHYLTPSDE 121

Query: 120 LAEEAYAVLRDALRQTRKVGLGQLSVRGREQLVSLKPCGRGMVLEVLRYADEVTKAQTYF 179
           +  EA++V+RDA+   +  G+ +L +  RE+ V L+PCG+G+V+  LRY DEV K + YF
Sbjct: 122 VGHEAFSVIRDAMVAEKVAGISRLVIGRRERAVMLEPCGKGIVVWTLRYGDEVRKPENYF 181

Query: 180 RGLPDDTADEDMLDLAVSIIDKRTAPFNPEEFHDRYVDALHRLIDKKKKAKGKRIIEEVD 239
             + D   D  ++ L  S+I++R+ P+NP    D   + L  +I+ K+K+  K++ +   
Sbjct: 182 ADIGDGDNDPKLMSLVTSLIEERSKPWNPNMVSDPVQEKLLEIIESKRKS-AKKVAKPKA 240

Query: 240 DEPTDRKAGNVIDLMAALKKSAGEAGRKAPAKGK 273
            E     AGNVIDLMAALK   G   +K P   K
Sbjct: 241 KEGEPVHAGNVIDLMAALK---GSLEKKKPGGKK 271