Pairwise Alignments

Query, 286 a.a., Ku domain protein from Sphingobium sp. HT1-2

Subject, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  197 bits (500), Expect = 3e-55
 Identities = 106/280 (37%), Positives = 174/280 (62%), Gaps = 9/280 (3%)

Query: 1   MPARAFWQGQIKLALVSIPVEIYPATKSGAAVSFRQIHEPTGKPIHYDKVVTGVGPVDPE 60
           M  RA W+G I+L+LVS PV +YPAT +   +SF Q+H+ T   I+   V   +G V+  
Sbjct: 1   MAPRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGLVERS 60

Query: 61  EILKGFEISKGNYVLLEQDEIEAVKIESRKTLDLVQFVEADAIDVLYYEKPYFVVPADDL 120
           +++KG+E     Y+++E  ++E+V+IES  T+++  FV+A ++DV+Y + PY++ P   +
Sbjct: 61  DLVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGAM 120

Query: 121 AEEAYAVLRDALRQTRKVGLGQLSVRGREQLVSLKPCGRGMVLEVLRYADEVTKAQTYFR 180
           AEE + VLR+ALR++ K+ + +L +  RE++V++ P   GM +  LR  +EV     YF 
Sbjct: 121 AEETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYFG 180

Query: 181 GLPDDTADEDMLDLAVSIIDKRTAPFNPEEFHDRYVDALHRLIDKKKKAKGKRIIEEVDD 240
            +P    D +ML LA ++I+++T  F+P+++ DRY  AL ++I +K K   K II +  +
Sbjct: 181 NIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGH-KPIIAQAPE 239

Query: 241 EPTDRKAGNVIDLMAALKKSAGEAGRKAPAKGKVPAKNAA 280
                  GNV++LM ALK S  +A  K PA+ K  A+ AA
Sbjct: 240 R------GNVVNLMDALKASLSQA--KPPARSKPKAEPAA 271