Pairwise Alignments

Query, 240 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD from Sphingobium sp. HT1-2

Subject, 818 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  193 bits (491), Expect = 8e-54
 Identities = 99/183 (54%), Positives = 124/183 (67%), Gaps = 3/183 (1%)

Query: 7   LAPYNAKRDFSRTREPRGKVGKTGGRSFVVQKHAATRLHWDFRLEIDGVLKSWAVTKGPS 66
           L  Y  KRDFS+T EP G +   GG  FVV KH AT  H+D RLE+DGVLKSWAV KGPS
Sbjct: 6   LEAYRKKRDFSKTPEPVGNL-TAGGNRFVVHKHHATADHYDLRLEVDGVLKSWAVPKGPS 64

Query: 67  LDPADKRLAVRTEDHPLDYGAFEGNIPKGEYGGGSVMLWDRGTWEPIPGKRADDLKDGHL 126
           L+PADKRLAV TEDHPLDY  FEG IP+GEYGGG +++WD+G W P+ G   DDL+ G  
Sbjct: 65  LNPADKRLAVETEDHPLDYIDFEGVIPEGEYGGGPMIVWDKGVWAPM-GDVDDDLRKGAF 123

Query: 127 HFILHGERMKGEWLLVRMKGRPSEK-RENWLLRKVEDDHASDSEDLVGHALTSILTARSM 185
            F L GE++ G W+L R+K RP E+ + NWLL K  D  A  S D++     S+ + R +
Sbjct: 124 KFRLAGEKLNGGWMLARLKRRPGEEDQRNWLLFKERDPAADTSIDILAARPESVKSGRRI 183

Query: 186 AQI 188
            ++
Sbjct: 184 EEL 186