Pairwise Alignments

Query, 179 a.a., Integrase from Sphingobium sp. HT1-2

Subject, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 89.7 bits (221), Expect = 4e-23
 Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 5/155 (3%)

Query: 6   RSTQRKVPRGADDEQALTEDIVALAKQYGRYGYRRVTALLCHAGWTVNHKRVERIWRREG 65
           R  +R+  R AD E  L   +  LA +  R+GYRR+  LL   GW VN K++ R++R EG
Sbjct: 24  RVYRRRSKRLADTE--LRVRMKELASERRRFGYRRLHMLLKREGWEVNWKKLYRLYRDEG 81

Query: 66  LKVPLRQPKRGRLWLNDGSCIRLRPEYPGHVWAYDFVEGRTHDGRKFRILTIIDEASREC 125
           L V  R  ++  +       I   P+ P   W+ DF+     DGR+FR+L +ID+ SREC
Sbjct: 82  LTVRKRGGRKRAVGTRTPMAI---PQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFSREC 138

Query: 126 LALIVARQLKHEDVLAALADLFISRGPPVHIRSDN 160
           LA +V   +    V   L  +   RG P  + SDN
Sbjct: 139 LAAVVDTSISGARVARELDRIAELRGYPCLVVSDN 173