Pairwise Alignments

Query, 430 a.a., Transposase, IS110 and IS111A family from Sphingobium sp. HT1-2

Subject, 337 a.a., transposase IS116/IS110/IS902 family protein (RefSeq) from Shewanella loihica PV-4

 Score = 43.9 bits (102), Expect = 7e-09
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)

Query: 276 NRDYQLLRMIPGIGPINALTILAEAGDLRRFSHHRQFLKFCGLDLATCQSGMFRGRTKLS 335
           + D + L  I G+  I A   ++ AGD   + + R F    GL      SG  +    ++
Sbjct: 208 HEDTKRLTAIRGVAEIIATASVSFAGDGSGYQNGRHFSANLGLVPKEFSSGGKQKLGAIT 267

Query: 336 KYGNARLRRTFWMATQVAIRQRDNSFRDKLGRYVAGYPNDPDRRRKAMTALTAKMARVAH 395
           K GN+ LRR         IR   N+  D+L  + A    +   ++KA  A+  K+AR+  
Sbjct: 268 KRGNSYLRRQLIQGAWSVIRYAKNN-DDRLSVW-ARKVIERRGKQKAAVAVANKLARIIW 325

Query: 396 AVIKTGTEYRP 406
           A++   TEYRP
Sbjct: 326 AMLYYKTEYRP 336