Pairwise Alignments

Query, 648 a.a., Cell division-associated, ATP-dependent zinc metalloprotease FtsH from Sphingobium sp. HT1-2

Subject, 630 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  522 bits (1344), Expect = e-152
 Identities = 275/526 (52%), Positives = 359/526 (68%), Gaps = 3/526 (0%)

Query: 81  VPVNDPKLTDLLDDYNVKYSGQAEQQP-SFWQIMLYQSLPFLLILGIAFFVLRQMQKGGG 139
           +P   P L   L D ++ +     +   + W ++     P LLI+G+ F   R     GG
Sbjct: 90  LPGTSPDLITRLRDSDINFDVHPPRNDGAIWGLLSNLIFPILLIVGLFFLFRRSGNVPGG 149

Query: 140 AGGAMGFGKSKAKLLTEKHGKVTFDDVAGIDEAREELQEIVEFLKDPSKFARLGGKIPKG 199
            G AM FGKSKA+   +    V FDDVAGI+EA+EELQE+V FLK+  +F  +G +IPKG
Sbjct: 150 PGQAMQFGKSKARFQMDAKTGVLFDDVAGIEEAKEELQEVVTFLKNSERFTAVGARIPKG 209

Query: 200 ALLVGSPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCI 259
            LLVG PGTGKTLLA+AIAGEAGVPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NAPCI
Sbjct: 210 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 269

Query: 260 VFIDEIDAVGRHRGAGLGNGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPAL 319
           VFIDEIDAVGR RGAG+G GNDEREQTLNQLL EMDGFE N GIII+AATNRPDVLD AL
Sbjct: 270 VFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDAAL 329

Query: 320 LRPGRFDRQVVVPRPDIEGREKILAVHMKKVPLAPDVNPRTIARGTPGFSGADLANLVNE 379
            RPGRFDRQ++V  PDI+GR +IL VH +   LA DV+   IAR TPGF+GADLANL+NE
Sbjct: 330 TRPGRFDRQIIVDAPDIKGRLEILKVHARNKKLAEDVSLDVIARRTPGFAGADLANLLNE 389

Query: 380 AALMAARRGKRLVAMDEFEAAKDKVMMGSERRSMVMTDDEKKMTAYHEAGHAIVAVHEPA 439
           AA++ ARR K  + + E + A D+V+ G E   +V     K++ AYHE GHAIV      
Sbjct: 390 AAILTARRRKDAITLTEIDDAVDRVVAGMEGTPLV-DGKSKRLIAYHEVGHAIVGTLVKD 448

Query: 440 SDPIHKATIIPRGRALGMVMRLPERDSYSYHRDKMHANMAVAMGGRVAEEIIFGYDKVSS 499
            DP+ K T+IPRG+A G+    P+ +     R ++ A +  A+GGR AE++IFG+D+V++
Sbjct: 449 HDPVQKVTLIPRGQAQGLTWFAPDEEQGLTSRAQILARIKGALGGRAAEDVIFGHDEVTT 508

Query: 500 GASGDIQYATKLARDMVTQWGMSDKLGPLQYEEQQGETFLGYSQSQRVHMSDETAKLIDK 559
           GA  D+Q  T +AR MVT++GMSD LGPL  E Q  E FLG     R   S+  A  ID 
Sbjct: 509 GAGNDLQQVTGMARQMVTRFGMSD-LGPLSLEGQSQEVFLGRDLMTRSEYSERIAIRIDA 567

Query: 560 EIRGLVEQGYARAQELLKGHEDQLHLLANAMLEYETLSGEEIKALL 605
           ++  +V+  Y    +L++ +   +  L + ++E ET+ G+E + ++
Sbjct: 568 QVHDIVDHCYQETLQLIRDNRIVIDRLVDLLIEKETIDGDEFRQIV 613