Pairwise Alignments

Query, 172 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 32  PRSVE-WQKAGEAARKAGNLTGATDALESALAVDPRNRAAYIELAEVARAQGLQGKAIRL 90
           P+S E W   G +  K G    +T+  + AL +DP N  A+  L  V    G   KA+ +
Sbjct: 56  PKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEM 115

Query: 91  YKEALLLDPTDVTAIAGQG 109
           Y ++L +D  +  A   +G
Sbjct: 116 YDKSLNIDSENSEAWKNKG 134



 Score = 35.4 bits (80), Expect = 1e-06
 Identities = 21/93 (22%), Positives = 38/93 (40%)

Query: 31  EPRSVEWQKAGEAARKAGNLTGATDALESALAVDPRNRAAYIELAEVARAQGLQGKAIRL 90
           + +S  +   G      GN   +      AL  +P++   ++         G+ G++   
Sbjct: 22  DQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTEC 81

Query: 91  YKEALLLDPTDVTAIAGQGEAMVAKGAIAKAKE 123
           + +ALL+DP +  A  G G  +   G   KA E
Sbjct: 82  FDKALLIDPENSEAFNGLGTVLSKTGNYQKALE 114



 Score = 35.4 bits (80), Expect = 1e-06
 Identities = 19/78 (24%), Positives = 35/78 (44%)

Query: 34  SVEWQKAGEAARKAGNLTGATDALESALAVDPRNRAAYIELAEVARAQGLQGKAIRLYKE 93
           S  W+  G         + A D  + +++++ +N   +    E     G   K+I  Y +
Sbjct: 127 SEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNK 186

Query: 94  ALLLDPTDVTAIAGQGEA 111
           ALL+D    TA+ G+G +
Sbjct: 187 ALLIDEKMETALLGKGNS 204