Pairwise Alignments

Query, 431 a.a., Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly from Sphingobium sp. HT1-2

Subject, 586 a.a., CpaE2 pilus assembly protein from Sinorhizobium meliloti 1021

 Score =  152 bits (384), Expect = 3e-41
 Identities = 112/379 (29%), Positives = 185/379 (48%), Gaps = 15/379 (3%)

Query: 31  AVASEMGWAPEKVNKGGMRNAVQSLSITASPQILFVDMSESGDP--LNDINSLAEVCEPG 88
           A+   M  A   V  GGM+ A        SP ++ V+ S+ G+   +  + +LA  C  G
Sbjct: 50  AIDRRMARATVTVKAGGMKEATALYGGVTSPNLVVVE-SDDGEARLMATLETLAMECVTG 108

Query: 89  TVVIAAGQVNDVRLYRDLVASGIQDYLLKPFGADQLRDALAQAQAVFLAPRDAGPERPHM 148
           T VI  G+ NDV LY+ L+ +G+ DYL+KP    +  D +A     F   RD+  E+   
Sbjct: 109 TKVIVIGRSNDVGLYKKLLDAGVSDYLVKPL---EPMDFVAAVHRCF---RDSTEEKLGR 162

Query: 149 TVAVVGTRGGVGASSMATSLAWMLSEKKKRPTALLDLDIHFGTNALAMDLEPGRGLTDAI 208
            VA VG +GG G+S++A ++A+ +S++      L DLD+  GT  L  D+E   G+ D +
Sbjct: 163 IVAFVGAKGGTGSSTLAHNVAYAMSKRVDADVLLADLDLQSGTLGLNFDIEAKHGMVDVL 222

Query: 209 ENPSRIDGLFIERAMVRASDMLAILSAEAPINQPMMTDGGAFYQLLEEFRQAFECSIIDL 268
           ++P R+D + + R  V  +D L +L A   +++ +    G    LL+  R +    ++DL
Sbjct: 223 QSPDRLDDVLLRRLAVSYTDRLHLLPATTDLDKFINLREGDVDHLLDVARSSSWHVVVDL 282

Query: 269 PRNMLIQHTHLMTDVNVAVVVTELSLAAARDTIRILSWLKS---NAPQARILVVANRV-H 324
           P  +      ++ + +  VV     LA  R+   ++ +LK    N P  R+  V N+V  
Sbjct: 283 PHILTQWTRKILLEADEIVVTATPDLAGMRNAKNLIDFLKKARPNDPPPRL--VLNKVGT 340

Query: 325 PGAPEISRKDFEQSIERKVDVIVPFDLRIAAQAAKLGKTLAETAKGSKVGAACTAMMDEV 384
           P   EI  KDF  ++  +  V + F+  +   AA  G+ + E+A  SK G A  ++   V
Sbjct: 341 PKLQEIKPKDFVAAVGLEEGVSLAFEPSLFGAAANNGRLVIESAPDSKAGKAIVSLAWRV 400

Query: 385 LGLAGDEADNPGAKSTARK 403
            G         G K+  +K
Sbjct: 401 GGTRERRTRQKGVKALLQK 419