Pairwise Alignments

Query, 319 a.a., 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.7.4) from Sphingobium sp. HT1-2

Subject, 290 a.a., hydroxymethylbutenyl pyrophosphate reductase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  120 bits (301), Expect = 4e-32
 Identities = 90/283 (31%), Positives = 134/283 (47%), Gaps = 13/283 (4%)

Query: 11  MTLLIAAPRGFCAGVDRAIIIVERAIEK------YGAP---VYVRHEIVHNKFVVDSLKA 61
           M ++ A   GFC GV  A+  ++R +++       G+P   +     I+HN  V+++   
Sbjct: 1   MNVIRARTAGFCMGVSLALRKLDREVDRAEEKAAQGSPRCRIATFGPIIHNPQVLEAYAG 60

Query: 62  KGAIFVEELDQVPDGVPVVFSAHGVPKAVPAKAEERGLDYLDATCPLVSKVHRQAERMVT 121
            G   + ++D+V  G  VV  AHGVP+        R    +DATCP V K     E    
Sbjct: 61  MGVRCLRQVDEVEAGDHVVIRAHGVPQQQEKALRSRDAVVVDATCPKVKKAQLGIEEQCR 120

Query: 122 AGRHILFIGHKGHPEVIGTFGQVPEGTMTLIETVEDAEALAPVDADNLAFL-TQTTLSVD 180
           AGR +L  G   HPEV G      EG + +  +V++ E L P+  +   FL  QTT    
Sbjct: 121 AGRTLLLFGEAEHPEVRGLLSYAGEGAL-VFGSVDELEGL-PLQPETEYFLAAQTTQDRV 178

Query: 181 DTAAIVATLERRFPAIIAPKGEDICYATSNRQTAVKAIAARCDAVYVIGAPNSSNSLRLV 240
                 A L  R    + P  E IC AT  RQ     IA + DA+ V+G  +S N+ RL 
Sbjct: 179 AFEVARAWLHERLGHEV-PVLETICDATRLRQQEAIDIARKVDAMVVVGGFDSGNTRRLA 237

Query: 241 EVAEREGTPARLIQRAEEIDFAWLDGVTTLGLTAGASAPEILV 283
           +VA  +G     ++   ++    L G   +GLTAGAS P+ ++
Sbjct: 238 DVAAAQGVFTVHVENESQLPVEQLRGCGIIGLTAGASTPKSII 280