Pairwise Alignments

Query, 315 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) from Sphingobium sp. HT1-2

Subject, 274 a.a., rRNA small subunit methyltransferase H from Pseudomonas fluorescens FW300-N2E2

 Score =  222 bits (565), Expect = 9e-63
 Identities = 136/265 (51%), Positives = 170/265 (64%), Gaps = 12/265 (4%)

Query: 44  GAQVFAFDRDPDAIREGQALADEKG-ITLIPGEFSRMEELLAERGVSS-VSGITLDIGVS 101
           G ++  FD+DP AI  GQALA E G   ++   F+ +   +AERG++  VSG+ LD+GVS
Sbjct: 9   GGRLLGFDKDPQAIATGQALAAEDGRFVIVQRSFAELASEVAERGLAGKVSGVLLDLGVS 68

Query: 102 SMQLDRPERGFSFQADGPLDMTMSQG-GMSAADFLNTAAEEDIADVIYRYGEEPRSRRVA 160
           S QLD PERGFSF  DGPLDM M    G+SAA+F+NTA  E+IA V   YGEE  S R+A
Sbjct: 69  SPQLDDPERGFSFLNDGPLDMRMDPSRGISAAEFVNTAPVEEIARVFKEYGEERFSGRMA 128

Query: 161 RAIV---DARPLERTGQLAAVVRRALGYKP--HDKKDPSTRTFQAIRIHVNRELEELERA 215
           RA+V   D +P ERTG LA V++ A    P     K+P+TR FQ +RIHVN EL +LE  
Sbjct: 129 RAVVERRDIKPFERTGDLAEVLKVA---NPAWEKGKNPATRAFQGLRIHVNNELGDLEVG 185

Query: 216 LEAAEALLEPGGRLAIVTFHSLEDRIVKQFLRKRSGSEAGG-SRHLPEKKAEVAPAFEKP 274
           LEAA   LE GGRL +++FHSLEDRIVK F+RK +  EA    R+LP +     P  +  
Sbjct: 186 LEAALEALEIGGRLVVISFHSLEDRIVKLFMRKLTKGEADNLPRNLPVRFEAFVPKIKIH 245

Query: 275 AKAVKPGETELARNPRARSATLRSA 299
            KA    E EL  NPRARSA +R A
Sbjct: 246 GKAQFASEAELKANPRARSAVMRVA 270