Pairwise Alignments

Query, 315 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) from Sphingobium sp. HT1-2

Subject, 326 a.a., methyltransferase (NCBI) from Rhodospirillum rubrum S1H

 Score =  281 bits (718), Expect = 2e-80
 Identities = 166/312 (53%), Positives = 202/312 (64%), Gaps = 12/312 (3%)

Query: 5   PHIPVLLTEVLDALAITPGERHVDGTFGAGGYSSAMAA-AGAQVFAFDRDPDAIREGQAL 63
           PH PV+L EVL AL       +VDGTFG GGYS  +   A  +V A DRDP A   G AL
Sbjct: 6   PHFPVMLDEVLSALEPHADGLYVDGTFGNGGYSRGLLERADCRVIAIDRDPAARVRGAAL 65

Query: 64  ADE--KGITLIPGEFSRMEELLAERGVSSVSGITLDIGVSSMQLDRPERGFSFQADGPLD 121
             E     TL+ G F  ME+LLA  G+S + G+ LD+GVSSMQLD+ ERGFSFQ DGPLD
Sbjct: 66  EAEFPGRFTLLSGCFGDMEQLLAAEGISRIDGVALDLGVSSMQLDQAERGFSFQKDGPLD 125

Query: 122 MTMSQGGMSAADFLNTAAEEDIADVIYRYGEEPRSRRVARAIVDAR---PLERTGQLAAV 178
           M M Q G +AAD +NT  E+ +AD++Y YGEE +SR VA AIV+ R   P  RT  LA V
Sbjct: 126 MRMGQQGQTAADLVNTLDEDRLADILYHYGEERKSRWVAHAIVERRAETPFSRTADLATV 185

Query: 179 VRRALGYKPHDKKDPSTRTFQAIRIHVNRELEELERALEAAEALLEPGGRLAIVTFHSLE 238
           +R  +  K  D  DP+TR+FQA+RI VN EL ELERAL A+E LL  GGRL +V FHSLE
Sbjct: 186 IRGVV-RKSRDGIDPATRSFQALRIVVNDELGELERALGASERLLRAGGRLVVVAFHSLE 244

Query: 239 DRIVKQFLRKRSGSEAGGSRHLPEKKAEVA----PAFEKPA-KAVKPGETELARNPRARS 293
           DRIVK F+R+R G   G SRHLP+     A    P+F+  + +AVKP + E   NPR+RS
Sbjct: 245 DRIVKAFVRQRCGESEGVSRHLPQASNAGAGNPPPSFQAVSRRAVKPLDAETRVNPRSRS 304

Query: 294 ATLRSAVRAGAP 305
           A LR+  R   P
Sbjct: 305 ARLRAVERTEFP 316