Pairwise Alignments

Query, 315 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) from Sphingobium sp. HT1-2

Subject, 319 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH from Ralstonia sp. UNC404CL21Col

 Score =  227 bits (579), Expect = 3e-64
 Identities = 143/314 (45%), Positives = 195/314 (62%), Gaps = 24/314 (7%)

Query: 6   HIPVLLTEVLDALAITPGERHVDGTFGAGGYSSAMA---AAGAQVFAFDRDPDAIREGQA 62
           H  VLL E +DAL       ++DGTFG GG+S  +      G ++ AFD+DP AI E   
Sbjct: 11  HQTVLLDEAVDALIWRDDGIYIDGTFGRGGHSRRILERLGPGGRLVAFDKDPAAITEAGT 70

Query: 63  LADEKGITLIPGEFSRMEELLAERGVSSVSGITLDIGVSSMQLDRPERGFSFQADGPLDM 122
           + D +   +    F++M + L  RGV  V+G+ LD+G+SS Q+D   RGFSF+ DGPLDM
Sbjct: 71  VEDAR-FAIEHDSFAQMAQCLDARGVERVAGVLLDLGISSPQIDEGARGFSFRMDGPLDM 129

Query: 123 TM-SQGGMSAADFLNTAAEEDIADVIYRYGEEPRSRRVARAIV-------DARPLERTGQ 174
            M +  G++AA +L  A E DIA VI  YGEE  + ++A+AIV       D  PL+RT +
Sbjct: 130 RMDTTRGITAAQWLAEADERDIARVIRDYGEERFAVQIAKAIVARRGQSGDRGPLDRTSE 189

Query: 175 LAAVVRRALGYKPHDK-KDPSTRTFQAIRIHVNRELEELERALEAAEALLEPGGRLAIVT 233
           LAA+V +A+  K  +K +DP+TRTFQA+RIHVN+EL +LE  L+AA   LE GGRL +++
Sbjct: 190 LAALVAQAV--KTREKGQDPATRTFQALRIHVNQELADLETGLKAAFERLEQGGRLVVIS 247

Query: 234 FHSLEDRIVKQFLRKRSGSEAGGSRHLPEKKAEVAPAFEKPAK------AVKPGETELAR 287
           FHSLEDRIVK+F++  +  E   +   PE +     A E PA        VKP E E++ 
Sbjct: 248 FHSLEDRIVKRFMQALARPEQSAA---PELRRAPLRAHELPAPQLRLLGRVKPSEAEVSA 304

Query: 288 NPRARSATLRSAVR 301
           NPRARSA +R A R
Sbjct: 305 NPRARSAIMRVAER 318