Pairwise Alignments

Query, 318 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Sphingobium sp. HT1-2

Subject, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 84/325 (25%), Positives = 140/325 (43%), Gaps = 41/325 (12%)

Query: 8   VAVLMGGWSAERPVSLSSGEGVAKALE-SRGHRVTRIDMDRDV--------------AAR 52
           + +L GG S+E  +SL S   + + LE +    V R++M ++               +A 
Sbjct: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65

Query: 53  LTETKA----DVVFNALHGVPGEDGTVQGMMDLMGLTYTHSGLATSVIAIDKQLTKQALV 108
           L   KA    D V   +HG PGE G +Q M++L G+ Y   G   S  + +K  +K    
Sbjct: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125

Query: 109 PHGIPMPGGQIVASESLYAGDPLPRPY------VLKPVNEGSSVGVAIVTAEGNYGNPIA 162
              IP      +   +  + D   + +       +K   +GSSVG   VT E    + IA
Sbjct: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTE----DQIA 181

Query: 163 RDSVGPWQEFPELLAEPYIRGRELTTAVLGDEALLVTE-----LRPKSGFYDFDAKYT-D 216
                 +    ++L E  ++ REL  +       L        + P+  FY ++ KY+ +
Sbjct: 182 PAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSAN 241

Query: 217 GMTEHVCPAE-IPDEITQACKAIALQAHQLLGCKGASRSDFRWDDSQGVEG-LYLLEVNT 274
                V  AE + ++  +  +  A +    +  +  SR DF        EG +YL EVNT
Sbjct: 242 SHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQ----EGQIYLNEVNT 297

Query: 275 QPGMTPLSLVPEQAKKLGIEYAELV 299
            PGMTP+S+ P+  +  G  ++E +
Sbjct: 298 FPGMTPISMFPKMLEHNGHRFSEFL 322