Pairwise Alignments

Query, 663 a.a., integral membrane sensor hybrid histidine kinase from Sphingobium sp. HT1-2

Subject, 801 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  266 bits (679), Expect = 4e-75
 Identities = 162/409 (39%), Positives = 231/409 (56%), Gaps = 17/409 (4%)

Query: 251 ARTSELSDAYEQLKRESAERAAAEDNLRQMQKMDAVGQLTGGIAHDFNNMLAVVVGGLEL 310
           A   +L++A  +L+ +  ER   E  L+QMQ+++AVGQLT G+AHDFNN+L V++     
Sbjct: 393 AAVDKLAEANRELRAQIQERERVEATLQQMQRLEAVGQLTAGVAHDFNNLLTVILTSASF 452

Query: 311 AKRKLRL-KPAEAG-HHLDNAMEGANRAAALTRRLLAFARSEPLLPNAVDPDSLLRGMAD 368
            +  L    PAE     L    E   R A LT +LLAFAR + L P A+D +  L  +  
Sbjct: 453 LQNDLEQGAPAERSLRRLQYIRESGERGATLTSQLLAFARRQQLTPTAIDLNDTLVSLLS 512

Query: 369 LVDRTIGDQIIVSFAHKASGWRIFVDQHQMENALLNLCVNARDAMEGRGKLTISTGQAQL 428
           L+  T+G  + +    +A+ W   VD  Q+E  +LNL +NARDAM   G+LT+ T    +
Sbjct: 513 LLKSTLGGSVSIETDTQANIWHALVDPTQIEMIILNLAINARDAMGDSGRLTLGTRNVVI 572

Query: 429 AANQI-GECPA-GDYVTVSVTDNGCGMTAEVAARVFEPFFTTKPVGKGTGLGLSQIFGFV 486
               +  E P+ G+YV +SVTD G GM+ EV ++ FEPFFTTK VGKG+GLGL+Q+FGF 
Sbjct: 573 TEPALRAEDPSPGEYVVLSVTDTGTGMSEEVLSKAFEPFFTTKEVGKGSGLGLAQVFGFA 632

Query: 487 RQSQGEIRIESELGTGTSVHIYLPRRILTEQEAAAEAPA-----SEQLHTLHPPTRILVV 541
           +QS G  RIES  G GT+V ++LPR   TE  AA E  A     S++ ++ H   RIL+V
Sbjct: 633 KQSGGGARIESRPGAGTTVKVFLPR---TEPPAATEPTAALSAGSQEDNSQH---RILLV 686

Query: 542 EDDPRVLNQTMAALAELGHLPIACDHPSKAAKLLSNNADIGLIMSDVLMPDMTGPEMIRT 601
           +DD  V   T   L  LG   I  D    A +LL    ++ L+++D  MP M G E+ R 
Sbjct: 687 DDDHAVREVTAQMLQNLGFAVIEADSGEHALQLLGEGIEVDLLLADFAMPGMNGGELARA 746

Query: 602 LPAHMRHLPVLFVTGFTGDATDSDDFRGHEVLRKPYTLNALGLALSNAL 650
           +      LPV+FVTG+           G+ +++KP+  + L   +  AL
Sbjct: 747 VRVGQPELPVIFVTGYA--ELCELGLVGYSIIQKPFREDQLANKIHLAL 793