Pairwise Alignments

Query, 816 a.a., Conjugative transfer protein TrbE from Sphingobium sp. HT1-2

Subject, 792 a.a., VirB4 type IV secretion protein from Sinorhizobium meliloti 1021

 Score =  199 bits (506), Expect = 5e-55
 Identities = 208/810 (25%), Positives = 335/810 (41%), Gaps = 64/810 (7%)

Query: 1   MLSLREYRNRSERLADHLPWAALIAPGIVLNKDGSFLRILAFRGPDLESATEAELVSACA 60
           M SL   R+R       +P+   +    +     + + ++A  G   E+A   +L +A  
Sbjct: 1   MPSLTTLRSRELGPETFIPYVRHVDESTIALDSRALMVMIALEGVSFETADILDL-NALH 59

Query: 61  RANNALKR--LGSGWALFFDAERRESHAYPQCAFPDAASWLVEAERRAAFQAEGTHFESR 118
           R  N L R       AL+    RR  ++YP+  F    S  +  + R     E   F + 
Sbjct: 60  RDLNTLYRNIADERLALWTHLIRRRDNSYPEGTFATPFSAALNDKYRERMVGEDL-FRND 118

Query: 119 YHLGLTWLPPGDAQDSAGRSL--VERPDADSGRDWRGALAQFITETDRVLDLLSGFMADV 176
            +L + W P  D  D A + L  + R          GAL     +   V   L  F   V
Sbjct: 119 LYLSILWSPARDPADKAAKLLSRLRRARRVGTELDEGALKHLRDKVIDVTAALRRFEPRV 178

Query: 177 RPLDDDATLTF------LHGTVSDRRHPVSTP----ATPMYLDGVLADTPLVGGLEPRLG 226
             L +   L F      LH  V  RR P+       A+ +Y D V+     +  +     
Sbjct: 179 LTLYEHDGLMFSEPSEVLHQLVGGRREPIPLTEGHIASAIYSDRVIVGRETIE-IRHEAD 237

Query: 227 DLHVRTLTILGFPSLSRPGILDALNHQDFGYRWVTRFIALDKTLSTKTLTSLRRQWFNKR 286
             +   L+   +P+ +R G+LDA+    F       F  + K                  
Sbjct: 238 SRYAGMLSFKEYPARTRTGMLDAVLTSPFELILAQSFSFVSK------------------ 279

Query: 287 KSITALLREVLYNSPAQLLDSD--ADNKVVDADEALQALGGDHVAFGYLTATITVTDTQR 344
               A  R ++     Q++ S   A +++ + D A+  L  +   FG    T++V     
Sbjct: 280 ----ADARMIMGRKQNQMVSSGDKAASQIEELDGAMDDLESNRFVFGEHHLTLSVFAPSV 335

Query: 345 GAVEEKVRRVERIVNGLGFTCVREGANAVEAWLSSLPGQVYANVRQPLVHTLNLAHLMPL 404
             + + + +    +   G    RE      AW + LPG      R   + + N A L P 
Sbjct: 336 KELTDNLAKARASMTSGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALSPF 395

Query: 405 SAVWAGPEENRHLAGPPLLIAKTAGSTPFRLSTHVGDVGHMMVVGPTGAGKSVLLSLIAL 464
            +   G ++     GP + + KTA  +P+  + H GD+G+  V GP+GAGK+VLL+ +  
Sbjct: 396 HSYPLGQKDGNEW-GPAVALLKTASGSPYYFNFHYGDLGNTFVCGPSGAGKTVLLNFMLS 454

Query: 465 QFRRYPDAQVYIFDKGNSARAAVLAMGGAHHALGSMEADGGALAFQPLAGIDDMAE-RGW 523
           Q  ++ D  V  FDK   A   V A GG +  L     +G      PL  ++   E + +
Sbjct: 455 QLEKH-DPHVVFFDKDRGADLYVRAAGGTYLPL----KNGIPTGCTPLKALELTPENKVF 509

Query: 524 AAEWIAALL-EHERVLVDPAVKDAVWTALGSLASAPREERTMTGLALLLQSN---ALRIA 579
              W+  L+    R L    ++D + +A+  LA  P E RT+  L   L +     +   
Sbjct: 510 LTRWVGKLVGSATRELSVTELRD-ISSAIDGLADLPVERRTIGALRTFLDNTNPEGIAAR 568

Query: 580 LQPYTLEGPHGPLLDAAEQHLSFAD-----VQCFETEALMEMGAAVAPVLTYLFHRLEER 634
           L+ +   GP G + D   + + F +     +  ++    ++     AP++ YLFHR+E+ 
Sbjct: 569 LRRWERGGPLGWVFDNVIEDIGFGEFGGGKLVGYDMTDFLDNEEIRAPLMAYLFHRVEQL 628

Query: 635 FDGRPTLLILDEAWIFLDHPLFAARIREWLKVLRKKNVAVLFATQSLADIAGSAIAPAII 694
            DGR  ++++DE W  L    F    +  LK +RK+N  +LFATQS  D   S IA  II
Sbjct: 629 IDGRRIIIVIDEFWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAIVSPIAHTII 688

Query: 695 ESCPQRILLPNDRAIEPQGREIYARFGLNDRQVELIAR--ATPKRHYYLQSARGNRLFEL 752
           E CP +I LPN R       +    F L +R+ EL+AR  +   R + L+    + + EL
Sbjct: 689 EQCPTQIFLPNSRG---NHGDYVDGFKLTEREFELVARELSIESRRFVLKQGHNSVVAEL 745

Query: 753 GLGPVALALCGASDPMAQARI-DAVLAEHG 781
            L  +   L   S   A   + DA+ AE G
Sbjct: 746 DLKGLDDELAILSGRTANVELADAIRAEVG 775