Pairwise Alignments

Query, 455 a.a., DNA repair protein RadA from Sphingobium sp. HT1-2

Subject, 455 a.a., DNA repair protein RadA from Pseudomonas fluorescens FW300-N2E2

 Score =  404 bits (1039), Expect = e-117
 Identities = 220/457 (48%), Positives = 301/457 (65%), Gaps = 10/457 (2%)

Query: 1   MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEEAAETVFSA----KHDLQGGGRAIT 56
           MAKAKR + C +CG+   +W GQC +CG WN++ E   E+  +A    +    G    I 
Sbjct: 1   MAKAKRMYGCTECGSTFPKWAGQCSECGAWNTLTETMVESGGAAAPTGRTGWAGQQAQIK 60

Query: 57  LIGLDSKVELPSRTSTGIAEFDRALGGGIVPGSATLIGGDPGIGKSTLLLQAAARVASRG 116
            +   S  E+P R ST   E DR LGGG+V GS  LIGGDPGIGKST+LLQ    +A+R 
Sbjct: 61  TLAEVSVEEIP-RFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLATR- 118

Query: 117 LTVAYISGEEASDQVRLRAQRLGLGNAPVQLASATSVRDILTTLSEGVPPALLIIDSIQT 176
           +   Y++GEE+  QV +RA+RLGL    +++ + T +  I+ T +    P +++IDSIQT
Sbjct: 119 MPALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIAT-ARLEKPKVMVIDSIQT 177

Query: 177 MHSDLIEGAPGTVSQVRASSQELIKFAKQRGTALILVGHVTKDGSIAGPRVLEHMVDTVL 236
           + ++ ++ APG VSQVR S+  L+++AKQ GTA+ LVGHVTK+G++AGPRVLEHMVDTVL
Sbjct: 178 IFTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVL 237

Query: 237 AFEGERSHQYRILRAIKNRFGGTDEIGVFSMVAEGLEEVANPSALFLTNRDETVTGATVF 296
            FEGE   + R+LRA+KNRFG  +E+GVF M   GL+EV+NPSA+FLT   E V G+ V 
Sbjct: 238 YFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVM 297

Query: 297 PALEGTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTCEVYL 356
              EGTRP+LVE+QALV   S  A PRR  +G D  RLAM+LAVL    G+     +V+L
Sbjct: 298 ATWEGTRPMLVEVQALVDD-SHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFL 356

Query: 357 NVAGGYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSSEIRPVSHTPLRLRESA 416
           NV GG ++ + A+DLA+ AA+MS+L  RP+P D+++FGE+ LS E+RPV     RL+E+A
Sbjct: 357 NVVGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAA 416

Query: 417 KLGFNRAFVPASGA--DGVKGISVSGFRTLAQLVDQM 451
           K GF RA VP   A  +   G+ +     L Q +D +
Sbjct: 417 KHGFKRAIVPKGNAPKEAPPGLQIIAVTRLEQALDAL 453