Pairwise Alignments

Query, 455 a.a., DNA repair protein RadA from Sphingobium sp. HT1-2

Subject, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

 Score =  385 bits (989), Expect = e-111
 Identities = 209/457 (45%), Positives = 302/457 (66%), Gaps = 14/457 (3%)

Query: 1   MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEE--AAETVFSAKHDLQGGGRAI--- 55
           M KAKR +VC +CG    RWQGQC+ CG WNSI E   AA    +    L G   A+   
Sbjct: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60

Query: 56  --TLIGLDSKVELPSRTSTGIAEFDRALGGGIVPGSATLIGGDPGIGKSTLLLQAAARVA 113
             TL  +D + E+P  TS G  E DR LGGGIVPG+A LIGG+PG GKSTLLLQ    ++
Sbjct: 61  VQTLADIDLQ-EVPRFTS-GFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLS 118

Query: 114 SRGLTVAYISGEEASDQVRLRAQRLGLGNAPVQLASATSVRDILTTLSEGVPPALLIIDS 173
            +  T+ Y++GEE+  QV +RA RLGL    +++ S T+V D +  ++E   P +++IDS
Sbjct: 119 GQMPTL-YVTGEESLQQVAMRASRLGLPKQHLKMLSETNV-DRICQIAEQEKPRIMVIDS 176

Query: 174 IQTMHSDLIEGAPGTVSQVRASSQELIKFAKQRGTALILVGHVTKDGSIAGPRVLEHMVD 233
           IQ MH   ++ +PG+V+QVR S+  L ++AKQ   A+ +VGHVTKDG++AGP+VLEH++D
Sbjct: 177 IQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIID 236

Query: 234 TVLAFEGERSHQYRILRAIKNRFGGTDEIGVFSMVAEGLEEVANPSALFLTNRDETVTGA 293
             +  +G+   ++R LR+ KNRFG  +E+GVF+M  +G+ EV+NPSA+FL+  +E  +G+
Sbjct: 237 CSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGS 296

Query: 294 TVFPALEGTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTCE 353
           +V    EGTRP+LVEIQAL V  S  A PRR  VG +  RL+++LAVL    GL  +  +
Sbjct: 297 SVMVVWEGTRPLLVEIQAL-VDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQD 355

Query: 354 VYLNVAGGYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSSEIRPVSHTPLRLR 413
           V++NV GG ++++ +ADLA+  AL+S+  +RP+P DVV+FGE+ L+ EIRPV     RL 
Sbjct: 356 VFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLN 415

Query: 414 ESAKLGFNRAFVPASG--ADGVKGISVSGFRTLAQLV 448
           E+ K GF +A VP +     G++G+ + G + L+  +
Sbjct: 416 EAFKHGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAI 452