Pairwise Alignments

Query, 309 a.a., Conjugative transfer protein TrbB from Sphingobium sp. HT1-2

Subject, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

 Score =  150 bits (379), Expect = 6e-41
 Identities = 108/299 (36%), Positives = 156/299 (52%), Gaps = 27/299 (9%)

Query: 6   VVEIMVNPDGALRLDRLGSGRI-DTEVRLAP-DQVERIIRLVASHVRAEVHAGQPIISAE 63
           + +IMVN  GA ++    +GR+ +T +R    +Q+  I + + S V   V    PI  A 
Sbjct: 151 IADIMVN--GANQVFIEVNGRVQETGIRFRDNEQLLNICQRIVSQVGRRVDESSPICDAR 208

Query: 64  LPPHADGRAGERFEGVLPPVS-SAPCFSIRKPAQRLHTLADYVADGLMGETVACALRAAV 122
           L        G R   + PP++   P  +IRK  +   TL   V  G +    A  L+   
Sbjct: 209 LGD------GSRVNVIAPPLAIDGPTLTIRKFKKEKLTLDQLVRFGSISPEGAEVLKIIG 262

Query: 123 TERLNILVAGGTSSGKTTLANALLAEMAPENSAVDSRVILIEDTRELQCPLPDTVALRTR 182
             R N+L++GGT SGKTTL N L   +         RVI  ED  ELQ   P  V L TR
Sbjct: 263 RVRCNVLISGGTGSGKTTLLNCLTGYIDH-----GERVITCEDAAELQLQQPHVVRLETR 317

Query: 183 PPHV------AMTDLVRSTMRLRPDRIIVGEVRGPEALDMLKAWNTGHPGGVATIHANSA 236
           PP++       M +LV++ +R+RP+RIIVGEVRGPEA D+L+A NTGH G + T+HANS 
Sbjct: 318 PPNIEGQGEITMRNLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSP 377

Query: 237 AAALTRLEQLCQEAVITVP----RPLIAEAIDVVVFIAG-RGVDRRVATVARVTGLAPE 290
             A+ R+E +      ++P    R ++  ++DV+V  A  R   RR+  +  V G+  E
Sbjct: 378 REAMARIEAMITMGGSSLPAKTIREMLVSSVDVIVQAARLRDGSRRITHITEVLGMEGE 436