Pairwise Alignments

Query, 309 a.a., Conjugative transfer protein TrbB from Sphingobium sp. HT1-2

Subject, 569 a.a., type IV-A pilus assembly ATPase PilB (RefSeq) from Shewanella loihica PV-4

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 24/174 (13%)

Query: 128 ILVAGGTSSGKT----TLANALLAEMAPENSAVDSRVILIEDTRELQCPLPDTVALRTRP 183
           ILV G T SGKT    T  N L  E    ++A D   I +E   ++   L          
Sbjct: 324 ILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVEINLEGVNQVHINLK--------- 374

Query: 184 PHVAMTDLVRSTMRLRPDRIIVGEVRGPEALDM-LKAWNTGHPGGVATIHANSAAAALTR 242
             +     +RS +R  PD ++VGE+R  E  ++ +KA  TGH   ++T+H NSAA  LTR
Sbjct: 375 AGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLV-LSTLHTNSAAETLTR 433

Query: 243 LEQLCQEAVITVPRPLIAEAIDVVVFIAGRGVDRRVATVARVTGLAPETGLYVL 296
           L  +       VP   IA ++++++    + + RR+ T  R     PE  L  L
Sbjct: 434 LINM------GVPGYNIASSVNLII---AQRLARRLCTECRQPEEVPEHELLKL 478